Shewanella sp. MTB7: HWQ47_21990
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Entry
HWQ47_21990 CDS
T10730
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shem03012
]
HWQ47_21990 (selB)
Translation factors [BR:
shem03012
]
Eukaryotic type
Elongation factors
HWQ47_21990 (selB)
Prokaryotic type
HWQ47_21990 (selB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB_bact
MMR_HSR1
GTP_EFTU_D2
WHD_2nd_SelB
WHD_1st_3rd_SelB
SRPRB
FeoB_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WBJ94504
LinkDB
All DBs
Position
complement(5045413..5047320)
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AA seq
635 aa
AA seq
DB search
MIIVTAGHVDHGKTSLIEALTGTNADRLPEEKQRGMTIELGYAFMDLGDNQRLAFVDVPG
HSKFINTMLAGVSSAKHALLIIACDDGVMPQTSEHLAILQLLNLEHLIVVLTKQDKVDSA
RVEAVKLQVTELLAQYQRCSPVYVVSAQTGLGISELNIAIKHLAQTQIHELNQSSVQTGF
RMAIDRVFSVKGAGLVVTGTVISGQVSRGQSLYLSGQNKAVKVRSLHSQGRVSEHAYSCQ
RVALNLTGVDQHRGAMRGDWLTALAPLVPPKVICGVFESCLPFKHWQNVQVHLGNSHTTA
RLGLLQLLPDNQALVELQCEQALSCVEQDRIIVRDAAAKSTLGALRVLDIAPPNRGKRSP
ERLALLSELKECTSLVASLQVQTLTHCVLRSAFMWANQLSCQSDILVKASAIIEVDGYLL
STVLREQIEQQLLTLVSEYHQASPELLGLTINRLQRMTHGQYPLAVLMHACDNLCLDNRL
NSTRGLVHLPQHNLALSNDEQLQWQLIKQQMLTAGGPLWSSDLAQQNNLDLAVVRPLCRK
LIQLGYISAIIKDRYVLTARLYFYANVIRDQIKTHGEVKTADFNSIIKLGRKASIQLLEF
YDRSGLTWRKQKDNSRVIRDSSVFIASDLAEEHRS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactgctggtcatgttgaccacggcaaaaccagcttaatcgaggcgctt
accggcaccaatgccgatcgcttaccggaagagaagcagcgtggcatgaccatcgagctt
ggttatgcctttatggatcttggcgacaatcaacgtttagcctttgtggatgtaccgggt
cacagtaaatttatcaataccatgctggctggggttagcagtgccaaacatgccttgctt
attattgcctgtgatgatggcgttatgccacaaacgagcgagcatctggccattttgcaa
ctgctcaatcttgaacacttaatcgtggtactgactaagcaagataaagtggacagtgca
cgggttgaagccgttaagttacaagtgactgagttgttagcccagtatcaaaggtgcagt
cctgtgtatgtggtgtcggcgcagacaggcttgggtattagcgagcttaatatcgccata
aagcatctggcacaaacccagatacatgaacttaatcagtcaagtgtacaaacaggcttt
cgaatggccattgatagagtgtttagcgttaaaggcgctggccttgtggtgactggcacg
gttatcagtggtcaagtgagcagggggcagagcctctatctttctgggcaaaataaagcg
gtaaaagtcagaagcttacacagccaaggccgagtgagtgaacatgcttatagttgccag
cgggttgcgcttaacttaacgggtgttgatcagcaccgcggcgcaatgcgcggcgattgg
ttaaccgcacttgcaccattagttccgcctaaggtgatatgtggtgtatttgaatcttgc
ttgccgtttaaacattggcaaaacgttcaagttcatttaggcaatagccataccaccgca
cgccttggtttattacaactgttgcccgataaccaagcgttagttgagctgcagtgtgaa
caagcgctgtcgtgtgtagagcaagatcgcattattgtgcgtgatgcagcggctaaaagc
acgctaggggcattacgagtactggatattgctccacctaaccgaggtaaacgcagtcct
gaacgattggcactgttaagtgagcttaaagagtgtacgagtcttgttgcaagtttacag
gtgcaaactttaactcactgtgtactaaggtcagcgtttatgtgggccaatcaattgagc
tgccaaagtgacatcttagtgaaagctagtgccataattgaggtggacggttacttactc
tctacagtgctccgcgaacagattgaacagcaactgttaacgctcgtgagcgaatatcat
caggcatcgccagagcttttaggtttaaccattaatcgtttacagcgtatgacccacggc
caatacccgttagcggtattaatgcacgcttgcgataacttgtgcctagataataggctg
aatagcaccagaggcttagtgcatctgccccagcataatctagcgctttcaaatgatgaa
caattgcaatggcaactgattaagcagcagatgctaacagctggtggacccctgtggtca
tcggatctggctcagcagaataatttggaccttgctgttgtgcgaccactttgtcgcaaa
ctcattcaactgggttatatatcggcgattattaaggatcgttatgtacttacagcacgt
ctttatttctatgccaatgttattcgagatcaaataaagacccatggtgaagtaaaaacc
gctgattttaattcgattattaaattaggcagaaaggccagtatccaacttttagagttc
tatgaccgcagtggattaacttggagaaagcaaaaggataactcaagagttatacgagat
agcagtgtttttatagcaagtgatttggcggaagaacataggagttga
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