Shewanella sp. MTB7: HWQ47_24520
Help
Entry
HWQ47_24520 CDS
T10730
Name
(GenBank) mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shem02000
]
HWQ47_24520
Transporters [BR:
shem02000
]
Other transporters
Pores ion channels [TC:
1
]
HWQ47_24520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st_1
MS_channel_1st
NblA
Motif
Other DBs
NCBI-ProteinID:
WBJ94959
LinkDB
All DBs
Position
5612884..5614488
Genome browser
AA seq
534 aa
AA seq
DB search
MYRMIAMIMLAIIGLSGLPAQADSSNISNQLTSLQTSIQHDVAQLSKTQGELANFTEYRI
KQNTELLHEQLKELMAKSNLDKEMLKPFIESHLIFIGKVDAYFKNKISKLQNQLGKGDDN
RIMMQLAVLETERDQQLQAYLEVLEWANTLGLNTGDKTALLTKSLIARANGFNSFVQFTQ
DKLKLAVKEVSLAGKDVTAEQTLNVTDLKERLSYASASLGVAIHLLDTLGQNTSDMKETL
FKSSGDITQDVLNMDVASSLFEQWLTSVQNYLIENGPGIVFKLFIFVLILFAAKLISKAV
RKLVKKAVSNSKLKVSILLQEFFISLSGKATFTLGVLIALSQLGIELAPLLAGFGVAGVI
IGFALQDTLSNFASGMMILIYRPYDVGDLINAAGVTGKVSHMSLVSTTIKTLDNQRLIIP
NNKIWGDTINNITVEHQRRVDMTFGIGYSDDIEKTERVLAEIIMAHPKVLKSPEPTIKLH
TLGESSVDFVVRPWAKPEDYWDVYWDITRTVKMRFDAENISIPFPQRDIHVYQK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcatgatcgccatgataatgctcgctatcatcggacttagcggcttaccagca
caagcagattcatccaatatctctaaccaactcacatcactgcaaacctctattcagcat
gatgtggctcaattgagcaaaacccaaggtgaactggctaatttcactgaatatagaatt
aaacaaaataccgaactgttacatgaacaactcaaagagttgatggctaagtcaaatcta
gataaggagatgctcaagccttttattgaaagtcacctcatctttattggtaaagttgat
gcctattttaaaaataaaatcagtaagctgcaaaaccaactaggtaaaggcgatgataat
agaatcatgatgcagcttgccgtattggaaactgaacgtgatcaacaattgcaagcctat
ttagaggtactcgagtgggcaaatactttaggtcttaatacaggtgataaaaccgcactg
ttgacaaaaagccttattgcccgagcgaatggctttaatagctttgttcagttcacacaa
gacaaattaaaactggctgttaaagaagtgagtcttgcaggtaaagatgtcaccgcagag
caaacgctcaatgtcaccgaccttaaagaacgcttatcttacgccagtgcgagcttaggt
gttgctattcatctccttgataccttaggtcagaatacttcagatatgaaagagacttta
tttaaaagctcaggtgatattactcaagatgtattgaatatggatgttgccagcagtcta
ttcgaacaatggcttacctcagtgcagaattacttgattgaaaatggtccgggtattgtt
ttcaaactgtttatttttgtcttgatcttattcgctgcaaagctgataagtaaagcggtt
cggaaattggtaaaaaaagcggtcagtaactctaaactgaaggtgagcatacttctgcaa
gagttctttatctcgctatcaggcaaggccaccttcactttaggcgtcttaatagccctt
tctcaattgggaatagaattagcacctcttctagcaggcttcggtgttgctggtgtgatt
atcggttttgcactgcaagataccctatctaactttgcctcgggtatgatgatcttaatc
tatcggccttacgatgttggcgatctaattaatgccgcaggtgtaaccggtaaagtcagc
catatgagcttagtctcaaccactattaagactctggacaatcaaagactcattatcccc
aacaacaaaatttggggcgataccatcaataacattaccgtcgaacatcagcgacgtgtg
gatatgaccttcggtatcggctacagcgatgatattgaaaagacagaaagggtattggca
gagatcattatggctcaccctaaagtgcttaagagtcctgaaccgactatcaagctacat
accttaggtgaatcatcggtcgatttcgttgttcgtccatgggctaagcctgaagattat
tgggatgtatattgggatattacgcgcacagtgaaaatgcgcttcgacgctgaaaacatc
agtattcctttcccacaacgcgatattcatgtttatcagaagtaa
DBGET
integrated database retrieval system
