Shewanella sp. MTB7: HWQ47_27300
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Entry
HWQ47_27300 CDS
T10730
Name
(GenBank) LysR family transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
shem Shewanella sp. MTB7
Brite
KEGG Orthology (KO) [BR:
shem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shem03000
]
HWQ47_27300
Transcription factors [BR:
shem03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HWQ47_27300
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WBJ95444
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Position
complement(6229381..6230226)
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AA seq
281 aa
AA seq
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MDIKFFQTFLEVVKTRHFGRAGEKLYISQSTVSSRIKILESYYDTKLLTRDRNNISLTST
GERLVGYAELITNTSIRSKLELSLTSGVDLQIKLAGTPNVWDAYLNDFLSYATKNFEKHS
FIADFQSRDQIRENLLNNTLDLAFTLEPVIAAGVSSTKVSKINIGLVHTVNWKEDSLCRY
IYVDWGPQFAVAQSSLLGGPVIPCLRTSSSNIALNYMIKNRGGAYLPLKSVQNLISSGQL
VQSLAAGIWEQSIYLNYMNNDVPPDVSSFIENIMYQLDSCE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaattttttcaaacgttccttgaagttgtgaaaactcgtcactttggaagg
gctggagagaaactctatataagtcaatctacggtgagttcacgtattaaaatactggag
agttattacgacactaaattattgacacgcgacaggaacaacataagtctaacatccaca
ggggaacgattggttgggtatgctgaattaataaccaatacttcaataagatctaaatta
gaactatcacttacaagcggagtagatcttcagataaagttagctggaacaccaaacgtc
tgggatgcttacttgaatgattttttaagttatgcaactaaaaattttgagaagcatagc
tttatcgctgattttcagagtagagaccaaattagagaaaatttgttaaataatactttg
gacttggcatttactttagaaccggtaatcgcggcaggtgtttcgagtactaaagtatca
aaaataaatattggattagtacatacagttaattggaaagaggattctttatgtcgatac
atttatgtagactggggaccacaatttgctgtcgctcaatcaagtttgttggggggaccg
gtgataccatgtttaagaacatcttcaagtaatattgcactaaattatatgataaagaat
agagggggagcatatttacccttgaaaagtgtacagaatctaatttcatctggtcagctg
gttcaatctttggcagcagggatatgggaacaatctatttatcttaactatatgaataat
gatgttcctcctgatgtaagttcatttatcgagaatataatgtatcagttggattcatgt
gaataa
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