KEGG   Shewanella sp. MTB7: HWQ47_27470
Entry
HWQ47_27470       CDS       T10730                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
shem  Shewanella sp. MTB7
Pathway
shem02020  Two-component system
Brite
KEGG Orthology (KO) [BR:shem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HWQ47_27470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:shem02022]
    HWQ47_27470
Two-component system [BR:shem02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   HWQ47_27470
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_2 HTH_8 AAA_5 AAA_lid_14 Mg_chelatase HTH_30 AAA_7 AAA DUF2089 HTH_7 AAA_3 DUF1798 T4SS_LegC2C7 IIGP MCM AAA_16
Other DBs
NCBI-ProteinID: WBJ95477
LinkDB
Position
complement(6265649..6267190)
AA seq 513 aa
MTVRPISGAELLTLTVVYHPDLSLIGARYQLQSSLSTWGICRSSPQFLTRDRKSRPLSDG
FISRKELILTTKGSNCYLSQGESSTEINVLNHKQSNEYCFGDEMLRKGVVVSLSGRVVLL
LHYSSAIEKKDVEQLDEYGLLGVSENTISVRSLISKVASLKLPILIRGESGTGKEVVANA
IHKMGNRKKAAFISINMASIPKDLVSSELFGSVKGAFTGAACRDGYFQRANNGCLFLDEI
GEAHADVQVALLRALETGVVQAVGSEKCEKLNVRIIAATDANLEKLIGIDSFKMPLLQRL
SGVVVELSPLRKRVDDFGILFSHFLIEVLEEVGQQDKFVNAEDDKQFYWAWLFAQFCQLN
WPGNVRQLKNVTTQLAVALLGYDNFSDFDWYGFVKSIANEVAIQAESNEQVASKVIENKR
KPREITDDEIKTVLAKHEWQIKQTADELGISRAALYLRIDACSELHRANNLTDQQLNRSF
IKYHGDLNQMVPELKVSRQALKRRLSEIGAVIN
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgaccgtgagacccattagtggtgcggagttattaacgcttacagttgtttatcaccct
gatttgtctttgattggtgcacgctaccaactgcaatcctcattatcaacatggggtata
tgccggtcttcaccacagtttttaactagagatagaaaatcacgaccattaagtgatgga
tttatcagtcgtaaagaactgatattgacgactaaaggttcaaactgttatttgtctcaa
ggagaaagtagtactgaaattaacgtgttaaatcataagcaaagcaatgaatattgcttt
ggtgatgagatgttacgtaaaggggttgtggtttctttgtcaggtagagtcgttttgctt
ttgcattatagttcagctatcgaaaaaaaagatgtagaacagcttgatgagtatggatta
ctgggggtaagtgaaaataccatatcagtgagatctttaatcagtaaggttgcaagttta
aagctgcctattttaatacgaggagaatctggtactgggaaagaggtggttgcgaacgct
attcataaaatgggaaatcgaaaaaaggccgcttttattagcattaatatggcctctatc
cctaaagatcttgttagcagtgagctatttggcagtgttaaaggtgcctttaccggcgca
gcatgtagagatggttattttcaaagagcaaacaacggatgtttatttcttgatgagatt
ggtgaagcccacgcagatgttcaggttgctcttttacgcgcattagaaactggagtagta
caagcagttggtagtgaaaagtgtgaaaagttgaatgtacgaattattgcggcgacagat
gcaaaccttgagaagttaataggtattgattcctttaagatgccactactacagcgttta
tctggtgtagttgtcgagctttcccctctccgtaaacgtgttgatgattttggtatctta
tttagtcattttttaatagaagtgctagaagaagttggtcagcaagataaatttgtaaat
gcagaagatgataagcagttctattgggcgtggttatttgctcaattttgtcaacttaac
tggcccggtaatgtacggcagttaaaaaatgtcacaactcaattggcagtagcactacta
ggttatgataacttttcagatttcgattggtatggatttgttaaatcgatagctaatgag
gttgctattcaagcagaatctaatgaacaagttgcttctaaagttattgagaataaacgt
aaacctagggagatcacagatgatgaaattaaaacagtcttagctaaacatgagtggcaa
attaaacaaacagctgatgaattaggtatatctcgcgctgctctctatttacgtatcgat
gcttgttctgaattacacagagctaataatttaactgaccagcaactgaataggagcttt
attaaataccacggtgatttaaaccaaatggtgcccgaactgaaagtgtcacgtcaagca
ctcaagcgacgcttaagtgagataggagcagttatcaattga

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