Shewanella sp. LC6: FJD32_000115
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Entry
FJD32_000115 CDS
T11827
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
shen Shewanella sp. LC6
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shen03009
]
FJD32_000115 (rsmB)
Enzymes [BR:
shen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
FJD32_000115 (rsmB)
Ribosome biogenesis [BR:
shen03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FJD32_000115 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_5
Methyltransf_37
Methyltransf_11
MTS
Methyltransf_12
FtsJ
BMT5-like
Cons_hypoth95
Methyltransf_36
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QQK62075
LinkDB
All DBs
Position
complement(28423..29709)
Genome browser
AA seq
428 aa
AA seq
DB search
MNLRALAAKAIFDVLEKGVSLSVALPEQQRHLASGKDKALLAELCYGVMRTLPQIEKRVA
ECLANPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLR
NIQRQLTPLSTESETLSYNTPGWLIKRLKAAYPDNWQEIIQQSHERPPMWLRNNRRSQSR
DEYLAALSELEIEASAGLSDDAILLAHPKDVATLPRFHEGAASVQDGAAQWAATLLAPQA
NELVLDACAAPGGKSCHLLELEPSIQLVAVDFDAKRLERVQQNLDRLSLKAEVIHGDAAN
IDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKP
GGTLLYATCSILPQENRDQISAFLARTADAKLDTLAQQASSQDIGWQITPGQHNMDGFYY
ARLLKATH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgcgagcactggcggccaaagccatcttcgacgtattagaaaaaggcgtgtca
ctttcagttgccctgccagaacagcaaaggcatcttgctagtggtaaagataaagccctg
ctcgccgagctctgctacggcgtaatgcgtactttgccacagatagaaaaacgcgttgcc
gaatgtttggccaatcccctcaaaggtaagcaaaggatcatccaccagctattgattgtt
ggctgttaccagctttacttcacccgcataccaagccatgcggccatatccgaaaccgca
gaggcctgccgtcagttaaagtttgagggaatggtaaaggtcgttaatggggtgctgcgt
aatattcagcgccaattaacgcctctgagcactgaatctgaaaccttaagctacaacacg
ccgggctggttaattaagcgcttaaaagccgcttatcctgacaactggcaagagataatc
cagcaaagccatgagcgtccacctatgtggctacgtaacaatcgccgctcccaaagccgc
gacgaatatcttgctgccctgagtgaactagaaatagaagccagtgcgggcctcagtgat
gatgcaatcctgcttgcccatcccaaggatgtggcgacattaccacgcttccacgaaggt
gcggcatcagtgcaagatggcgcagcccaatgggccgcgaccttactggctccgcaagcg
aatgaactggttcttgatgcctgtgcggctccgggcggtaaaagctgccatttactcgaa
cttgaacctagcatccaactggttgccgtcgatttcgatgccaaacgtctcgagcgcgtg
caacagaaccttgaccgtttatcattaaaagcggaagttattcatggcgatgcggccaat
atcgactcatggtggcagggtgaacaatttgatcgtatcttactcgacgcaccttgctca
gcgacgggcgttatccgccgccatcccgatatcaaatggttacgcaaaaaccatgacatc
gaagaactggcagagctgcaaagacaaattctcgatcactgctggaagtggctcaagccc
ggtggcacactcctgtatgcaacttgctctattttgccgcaggaaaatcgagaccaaatt
agtgcatttttagccagaaccgcagatgctaagctagacacacttgcccagcaggcttca
agccaagatataggttggcaaatcacgccgggacaacacaacatggatgggttttattac
gcccgtttattgaaagcgacccattag
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