Shewanella sp. LC6: FJD32_002440
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Entry
FJD32_002440 CDS
T11827
Name
(GenBank) DEAD/DEAH box helicase
Organism
shen Shewanella sp. LC6
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
QQK58457
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Position
516525..519767
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AA seq
1080 aa
AA seq
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MTLSQEHLLQVDQHWAVQSISAERRDTAMEMAERRLVDVALGNLLEHAATEFDSDLLEQV
ATAYELAAIEGIGALLHPVANQDNKNIRELAQAGAFRAFGLYRVLPVPSDNEARLFHVLH
VSGLAYCADRWTDLRRWFEEQNSTLAVPSVAGVTWDKRLLYRIFDCWLRLLRKNRWDDLD
QISEIVLGLRNDQANYEKALLEQTQGAEAQSIAMRLVALYHWAKATERLAVYMLQGEPVA
IDAQLDQHFEAAQKAAQASKDPQLEMILRWLHVASRKMVAGSLWWVAHTVNSRVTRFVSH
VTKHKSLFELLPPQRAALQEQGLLDQASRAVIVDLPTSGGKTALAQFRMLQALNQFDQDD
GWVAYVAPTRALVSQITRRLREDFGPLGIQVEPLTGAIEVDAFEEALLGEARAFQVLVAT
PEKLQLVMRNKKVARPLALVVMDEAHNIEDESRGLRIELLLATIKQESPRANFLLLMPFV
PNANDLAQWLAADRGRSISLGTSAWQPNERIVGLFDIHKGEKRGDWNLSFETLTTTQRTI
HLKGIHNVDGNRPLQKLTYSSAKGLATQAVAMAKVFSKRGTSIAVAQTIPDAWSIARKVA
AELEPLVQVHEDIKLVQRFLAAEISEDFELIDMLSKGVVVHHAGLPAEALSLIEWLTEAG
HIRVMCATTTIAQGLNFPVSSVFLATRKLPYGNEMSHRAFWNLAGRAGRIGHDSVGVIGI
AAGAQPNEIRKYVSDATASLVSRLEGMLDDLQAAGELANLSWVMQQEQWADFRSYIAHLW
NEKRNLDAVIGEAEQLLRNTYGFGSLRAKADKASQEKADALLEATKGYVRKLAEHPENAS
LADVTGFSPEGVRSTLLDLNNLENKLTLADWEPSSLFGDKSKSVLPSLMGIMLRVPQLQE
SLREISKGQGNSHRKLADITQAWVTGSSIESIAKTYFEGDSLTDQISKACRAVYRDLANN
GAWGLSALSKMPTSGLDFEAMTDEEKRRLNNLPAMLYHGVKTEEGVLMRMNSVPRSIAER
AGEDFKARTEAGAENTLSPRKASEYLKSLKPDDWARLKPDNSSLSGEDYLKVWKRLSGEA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgacgctttcacaagagcacttactacaggtagatcagcattgggctgttcagtccatt
agcgctgagcggcgtgatacggctatggaaatggcggagcggcgcttggttgatgtggcg
ctgggtaatctactcgaacatgcggcaactgagtttgacagtgacttgttagagcaagta
gcaacagcgtatgagttggccgcgatcgaaggcattggcgctttgttgcaccctgttgcc
aatcaggacaataaaaatattcgtgagcttgcacaagctggcgcgtttcgagcgttcggg
ctttatcgtgtgttacccgtaccgagtgacaatgaggcgcgcttgtttcatgtgttgcat
gtgtcgggtttggcgtattgcgccgatcgctggaccgatttacgtcgatggtttgaagag
cagaacagtacattagcagtacccagtgtggcaggtgttacttgggataagcgtctgctt
taccgaatttttgattgttggttacgactactacgtaaaaaccgctgggacgacttagat
cagatttcagagattgtacttggtttacgaaacgatcaagcgaactacgaaaaagcgtta
ctagaacaaactcaaggtgcagaggcgcaaagcatagcaatgcgtttagtggcgctttat
cactgggccaaagcaacagagcgtttagcggtgtacatgctgcaaggcgaaccggtagcg
atcgatgcacaattagatcagcattttgaagcggcgcaaaaagcggcacaagcctcgaaa
gacccgcagctcgaaatgattttacgctggttacatgtcgcaagccgaaaaatggtcgct
ggctctttatggtgggtggcgcatacggttaactcccgtgtgacacgctttgtttcccat
gtgactaagcacaagagcttatttgaactgttaccaccgcaacgagcggcactgcaagag
caaggtttactcgatcaagccagtagagcggtaattgttgatttgcctacatccggcggt
aaaaccgcgctggcacaattccgcatgttgcaagcgctgaatcaatttgatcaggatgat
ggttgggtggcctatgttgcgccaactcgtgctttggtttctcaaattacccgacgatta
cgtgaagattttggcccattaggtattcaagttgagccgttaactggcgcgattgaggtt
gatgcttttgaagaagcgcttttgggtgaagcacgtgcttttcaggttttggttgcaaca
cctgagaaacttcagttggtgatgagaaacaaaaaagtcgctcgcccattggccttagtt
gtgatggatgaagctcacaatattgaagatgagtctcgtggcttgcgcattgaacttctg
cttgcaacgattaagcaagaatcacctcgggcaaacttcttactcttgatgccatttgtg
ccgaatgctaacgatttagctcaatggctagccgctgatcgtggtcgaagcatcagcttg
ggcacctctgcttggcaaccgaatgagagaattgttggcttatttgatattcataaaggt
gaaaaacgtggtgattggaatttaagttttgaaacgttgacgaccactcaacgaacgatt
caccttaaaggaatccacaatgtagatggtaaccgccctctgcaaaaactgacgtactct
agcgctaaggggctcgcaacacaggctgttgctatggctaaggttttctctaagcgtggt
accagtattgctgtagcgcagacaattccagatgcttggagtattgctcgtaaagttgcc
gcagagcttgaacctttagttcaggtgcacgaagacattaaactggttcaacgttttctt
gcggctgagattagtgaggactttgagctaattgatatgttgtcaaaaggtgttgttgtg
catcatgcaggcttacccgctgaggcgctttcattaatcgaatggcttacagaagctggc
catattcgagtgatgtgcgcaacgacaaccatagcacaagggcttaacttccctgtttca
tctgtttttcttgcgacgagaaaattgccttacggcaatgaaatgtcgcatcgggcattt
tggaacctcgcgggacgagctgggcgtatcggccatgatagcgtaggcgttatcggtatt
gcagcaggtgcacagccgaatgagatccggaaatatgttagtgatgcaactgcatcgtta
gtttctcgcctggaaggaatgctggatgatcttcaagctgcgggggaattagcaaactta
tcttgggttatgcagcaagaacaatgggcagacttcagaagctatatcgctcatttatgg
aatgaaaaacgtaacttggacgctgtaattggtgaagctgaacaattactgcgaaatacc
tacgggtttggttctcttcgcgctaaagctgataaagcctcgcaagagaaagctgacgcg
cttcttgaagctactaaagggtatgttagaaagttagctgagcatccagaaaatgcttcg
cttgctgatgttacaggcttctctcctgagggggttcgttcaactttattggatttgaat
aaccttgaaaacaagttaacgcttgcagattgggagccttcgagtctatttggcgataaa
tcgaagtctgtgctgccaagcttgatggggattatgctgcgggttccgcagttacaagaa
agtttacgagagatcagcaaaggacaggggaatagtcatcgtaaacttgctgatattacc
caggcttgggtaacaggtagctccattgaatctatagcgaagacttactttgaaggtgat
agccttacagatcaaatatctaaagcttgcagagcagtttatagagatttggccaataat
ggcgcttgggggttgtcggcattaagcaaaatgccaacttcagggcttgattttgaagcc
atgacagacgaagaaaagcgcagattaaataacctcccagcgatgctttaccatggggtg
aaaaccgaagaaggcgtgttgatgcgcatgaacagcgttccgcgtagtattgctgaacgt
gccggtgaagactttaaggctcgaactgaagccggtgcagaaaatactctgtcgcctcga
aaagccagcgaatatctgaagtctttgaaaccggatgattgggcgcgtttgaaacctgat
aattcctcgctgtccggcgaagactatttgaaagtatggaaacggctttcaggtgaagct
taa
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