Shewanella sp. LC6: FJD32_003225
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Entry
FJD32_003225 CDS
T11827
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
shen Shewanella sp. LC6
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shen03019
]
FJD32_003225
03009 Ribosome biogenesis [BR:
shen03009
]
FJD32_003225
Messenger RNA biogenesis [BR:
shen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FJD32_003225
Ribosome biogenesis [BR:
shen03009
]
Prokaryotic type
rRNA processing factors
FJD32_003225
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Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF8260
Motif
Other DBs
NCBI-ProteinID:
QQK58598
LinkDB
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Position
691055..692563
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AA seq
502 aa
AA seq
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MNTSRLNPNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKI
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQ
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIEQEEERSRLKKITLPFVDEDG
GFIIRTAAEGVGEDELAQDAAFLRRVWSKVSERRQRRGVALLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFAELQAFAQEFMPEIADKIEHYSGPAPIFDLYDVENEIQRALGRKVELK
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
FIDMLSDEHKTRVLNSLNSALAKDRVKTNVSGFSGLGLVEMTRKRTRESLEHVLCSECPA
CQGTGSMKTVETVSYEIFREIIRLNRAYDADEFLLYCSPAVYNSLSGDESHLVAELEVYI
GKRIRLQNEPMYSQHKYDVVMM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccagtcgcttaaatccgaataaaattcagcgcaagatgggttcagaattactg
attaatgtaaccccctctgaggcgcgcgttgccttagtcgagcacggcgtgctgcaagaa
gtccatattgaacggcgcatgaagcgtggtctggtgggcaatatttacaagggcaaaatc
agccgtgtgttgcccggcatgcaggccgcctttgtggatattggcttagataaagccgcg
tttttacatgcctccgacattgtgccgcacactgaatgcgtggccgatgtggagaagggc
cattttgtggtccgtgatatcgccgagctggttcgccaagggcaagatattatggtgcaa
gtggtgaaagaccctctgggcactaaaggtgcgcgcctaaccacagatatcacactgcct
tcccgttatttggtgtttatgcctggctctagccatgttggggtgtcccagcggattgag
caggaagaagagcgcagtcgtcttaaaaaaatcactctgccattcgtcgatgaagacggc
ggctttattatccgcaccgccgccgaaggcgtaggtgaggacgaacttgcccaagatgcg
gcttttttgcgccgagtatggtctaaggtctccgagcggcgtcagcgccgtggcgtagca
ttactctatcaagatctggccctgccggtgcgcattgtgcgcgactttgtgggaaccgaa
ttagaccgaattcaagtcgattcgcgccgcacctttgccgagctgcaagccttcgcccaa
gagtttatgccggaaatcgccgacaagattgagcactattctggcccagcgccaattttc
gatttgtacgatgtcgaaaatgaaatccagcgtgctctgggacgtaaggtggagcttaaa
tctggcggttatctgattatcgatcagactgaagctatgactacggtcgatatcaacact
ggtgcctttgtgggccaccgtaatcttgaagaaaccatctttaacactaaccttgaagcc
acccaagcgattgcacggcaactgcggctgcgaaatctcggcggcatcatcattatcgac
tttatcgatatgctgagcgacgagcataaaacgcgggtactcaatagcttaaatagtgcg
ctcgccaaggacagagttaagactaatgtcagtggtttctctgggttgggtctagttgaa
atgacccgtaagcgcacccgcgagagcttagagcatgtgctatgcagtgagtgtccagcc
tgtcagggcacgggtagcatgaagacggtagaaactgtttcttatgaaatcttccgcgaa
attattcgcttgaatcgggcctatgacgccgacgagtttttgctttactgctcgcccgct
gtctataacagcttaagtggagatgaaagtcatttggtcgccgagcttgaagtttatata
ggtaagcgtattcgcctgcaaaatgagcctatgtattcccagcataaatacgacgtggtg
atgatgtag
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