KEGG   Shewanella sp. LC6: FJD32_007325
Entry
FJD32_007325      CDS       T11827                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
shen  Shewanella sp. LC6
Pathway
shen00521  Streptomycin biosynthesis
shen00523  Polyketide sugar unit biosynthesis
shen00541  Biosynthesis of various nucleotide sugars
shen01100  Metabolic pathways
shen01110  Biosynthesis of secondary metabolites
shen01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:shen00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FJD32_007325 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FJD32_007325 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FJD32_007325 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FJD32_007325 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FJD32_007325 (rfbB)
Enzymes [BR:shen01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FJD32_007325 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short Sacchrp_dh_NADP KR Gp_dh_N
Other DBs
NCBI-ProteinID: QQK59341
LinkDB
Position
1598225..1599313
AA seq 362 aa
MKILVTGGAGFIGSAVVRHIIKNTQDSVINVDKLTYAGNLESLASVDKNERYVFEQVDIC
DRAELDRVFSQYKPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEATRAYWNTLAE
DPKKVFRFHHISTDEVYGDLPHPDEQEGPLPLFTETTSYEPSSPYSASKASSDHLVRAWL
RTYGLPTLVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARA
LYKVVTEGLVGETYNIGGHNEKQNLEVVQTICNILDVLVPKDTPYAEQITYVTDRPGHDR
RYAIDSSKMSIELNWTPVETFETGLRKTVQWYLDNQTWCQNVQDGSYQRERLGEINMTAK
GK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaaaattctagttacaggtggagcaggttttattggctcagcagttgttcgccatatt
ataaaaaatactcaagatagcgtaatcaatgttgataaattaacttatgcaggcaatctt
gagtcacttgcaagcgtagacaaaaatgaaagatatgttttcgagcaagttgatatttgt
gaccgtgctgagctggatagagtcttttcacaatataaacctgatgcagtaatgcatttg
gcggcagagtcccatgtagaccgttcaattaccggcccagctgattttattcaaaccaat
atcgtaggtacttatacgcttcttgaagcaacgcgtgcttattggaatacgttagccgaa
gatcctaaaaaagtatttcgttttcatcatatctcaacagacgaagtgtatggtgattta
ccgcatcccgatgagcaagaaggaccgcttccattatttactgaaacaacttcttacgaa
ccaagcagcccttactctgcttcaaaagcctcaagcgatcacttagtaagagcatggtta
cgtacttatggcttaccaacgctagtaactaactgctctaacaactatggtccatatcac
ttccctgaaaagttaatccctttagtgattttaaatgcattagaaggtaaggcattacca
atctatggcaaaggagatcaaattcgtgattggctctatgtagaagatcatgctcgtgca
ctctacaaggtggtaactgaaggtttggttggcgaaacttataacattggtggtcataac
gagaagcaaaatctcgaagtcgtacagactatctgcaatattttagatgttcttgtacca
aaagatacgccgtatgcagaacaaatcacttatgtaacagatcgtccaggccatgaccgt
cgttatgcgattgactcatcgaaaatgagcatagagctaaactggactcctgttgaaaca
tttgaaacaggcctacgtaaaaccgttcaatggtatttagataatcaaacgtggtgtcaa
aacgtacaagatggttcatatcagcgtgagcgtctgggcgaaataaatatgacagctaaa
ggaaaatag

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