Shewanella sp. LC6: FJD32_007325
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Entry
FJD32_007325 CDS
T11827
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
shen Shewanella sp. LC6
Pathway
shen00521
Streptomycin biosynthesis
shen00523
Polyketide sugar unit biosynthesis
shen00541
Biosynthesis of various nucleotide sugars
shen01100
Metabolic pathways
shen01110
Biosynthesis of secondary metabolites
shen01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FJD32_007325 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FJD32_007325 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FJD32_007325 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FJD32_007325 (rfbB)
00525 Acarbose and validamycin biosynthesis
FJD32_007325 (rfbB)
Enzymes [BR:
shen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FJD32_007325 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
QQK59341
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All DBs
Position
1598225..1599313
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AA seq
362 aa
AA seq
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MKILVTGGAGFIGSAVVRHIIKNTQDSVINVDKLTYAGNLESLASVDKNERYVFEQVDIC
DRAELDRVFSQYKPDAVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEATRAYWNTLAE
DPKKVFRFHHISTDEVYGDLPHPDEQEGPLPLFTETTSYEPSSPYSASKASSDHLVRAWL
RTYGLPTLVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARA
LYKVVTEGLVGETYNIGGHNEKQNLEVVQTICNILDVLVPKDTPYAEQITYVTDRPGHDR
RYAIDSSKMSIELNWTPVETFETGLRKTVQWYLDNQTWCQNVQDGSYQRERLGEINMTAK
GK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctagttacaggtggagcaggttttattggctcagcagttgttcgccatatt
ataaaaaatactcaagatagcgtaatcaatgttgataaattaacttatgcaggcaatctt
gagtcacttgcaagcgtagacaaaaatgaaagatatgttttcgagcaagttgatatttgt
gaccgtgctgagctggatagagtcttttcacaatataaacctgatgcagtaatgcatttg
gcggcagagtcccatgtagaccgttcaattaccggcccagctgattttattcaaaccaat
atcgtaggtacttatacgcttcttgaagcaacgcgtgcttattggaatacgttagccgaa
gatcctaaaaaagtatttcgttttcatcatatctcaacagacgaagtgtatggtgattta
ccgcatcccgatgagcaagaaggaccgcttccattatttactgaaacaacttcttacgaa
ccaagcagcccttactctgcttcaaaagcctcaagcgatcacttagtaagagcatggtta
cgtacttatggcttaccaacgctagtaactaactgctctaacaactatggtccatatcac
ttccctgaaaagttaatccctttagtgattttaaatgcattagaaggtaaggcattacca
atctatggcaaaggagatcaaattcgtgattggctctatgtagaagatcatgctcgtgca
ctctacaaggtggtaactgaaggtttggttggcgaaacttataacattggtggtcataac
gagaagcaaaatctcgaagtcgtacagactatctgcaatattttagatgttcttgtacca
aaagatacgccgtatgcagaacaaatcacttatgtaacagatcgtccaggccatgaccgt
cgttatgcgattgactcatcgaaaatgagcatagagctaaactggactcctgttgaaaca
tttgaaacaggcctacgtaaaaccgttcaatggtatttagataatcaaacgtggtgtcaa
aacgtacaagatggttcatatcagcgtgagcgtctgggcgaaataaatatgacagctaaa
ggaaaatag
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