Shewanella sp. LC6: FJD32_009610
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Entry
FJD32_009610 CDS
T11827
Symbol
rlmA
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
shen Shewanella sp. LC6
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shen03009
]
FJD32_009610 (rlmA)
Enzymes [BR:
shen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
FJD32_009610 (rlmA)
Ribosome biogenesis [BR:
shen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FJD32_009610 (rlmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_32
Methyltransf_23
Methyltransf_29
mRNA_G-N7_MeTrfase
MTS
Methyltransf_9
Methyltransf_33
Methyltransf_36
Motif
Other DBs
NCBI-ProteinID:
QQK59737
LinkDB
All DBs
Position
2063142..2063957
Genome browser
AA seq
271 aa
AA seq
DB search
MQYICPLCALPLTLTQRTWGCPQAHKFDMAKEGYVNLLPVQKKNSKDPGDNQQMMFARRE
FLNAGYYQILSDRVNQLALQYASSAQQILDIGCGEGYYSHRLYNALVAHHFCYLQGVDIS
KSAIKYAAKRYPNLSFCVASAYEMPIPSNSIDLAIRIYAPSKVEELQRIMAPSGILITVS
PGPLHHFALKQQIYDQPRLHPESEARVDGFECLHQERLSAQLDLNDSKDIGNFLEMTPYA
WKFTAEQKQAFSQSGLSCELDFQIEVHRISV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatatatgtcctttgtgcgcgttacccctcaccctaacacaacgaacttgggga
tgcccgcaggcacacaagtttgacatggcgaaagaaggttatgtcaatttgcttcccgtt
cagaaaaaaaactcgaaagatccaggtgataatcagcaaatgatgtttgctcgtcgggag
ttcttaaatgcgggttattatcaaatcttaagtgatagagttaatcaactggcactccaa
tatgccagtagtgcacagcagatccttgatataggttgtggtgagggttactacagtcat
cgtttatataatgcccttgttgctcatcatttttgttatttacagggcgttgatatctct
aagtcggcaataaaatatgcagccaagcgctatcctaacttaagcttttgtgtagcgagt
gcctatgaaatgccgattccatctaatagcattgatttagcgattcgaatttatgcacca
tcaaaagtagaagaacttcagcggatcatggcacctagcggcattcttatcacggtatcg
cctgggcctttgcatcattttgcgctaaaacaacagatttatgaccagccaagattgcat
cctgagtctgaggccagagttgatggatttgaatgcctacatcaagagcggcttagcgcg
caactcgatcttaatgacagtaaagatatcggcaattttctcgaaatgactccctatgcg
tggaagtttaccgcagagcagaaacaagcattttctcagagcggattaagctgtgagtta
gatttccagattgaagtacatcgcatttcagtctag
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