Shewanella sp. LC6: FJD32_011065
Help
Entry
FJD32_011065 CDS
T11827
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shen Shewanella sp. LC6
Pathway
shen03030
DNA replication
shen03430
Mismatch repair
shen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJD32_011065 (dnaQ)
03430 Mismatch repair
FJD32_011065 (dnaQ)
03440 Homologous recombination
FJD32_011065 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shen03032
]
FJD32_011065 (dnaQ)
03400 DNA repair and recombination proteins [BR:
shen03400
]
FJD32_011065 (dnaQ)
Enzymes [BR:
shen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJD32_011065 (dnaQ)
DNA replication proteins [BR:
shen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJD32_011065 (dnaQ)
DNA repair and recombination proteins [BR:
shen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJD32_011065 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QQK60001
LinkDB
All DBs
Position
2393162..2393890
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISNASRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQA
IDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPL
GPKTRDICDILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLS
MTGGQTKFNLSNEEVGQEAGGIQRFDPASLNLKVISASADELVIHEQRLDLVAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatctcaaacgcaagccgtcaggttattttggatactgaaaccactggtatg
aaccaggggagtggtgcggtgtatttaggacaccgaattattgagataggttgtgttgag
gtcatcaaccgccgtttaacggggcgttattaccatcaatatatcaatcctggccaagcg
attgatccagaagcgattgctgttcacgggatcaccgatgagcgtgttgcaaatgagcca
agatttcatcaaatagcgcaagagtttatcgattttatcagtggcgcagaaattgtagcc
cataacgcaaacttcgacgtgagctttatggaccatgagttttccttactgcaaccgtta
ggaccaaagactcgcgacatttgtgatattttagactccctcgatatcgctaagtttttg
catcctgggcaaaaaaacaacttagacgctctctgcaaacgatatggcatcgacaattcc
cgccgccattaccacggcgcattactcgacgccgaaattcttgccgatgtgtatttgtcg
atgacgggaggtcagactaagttcaatctctctaacgaagaagttggtcaagaggcggga
ggcattcaacgctttgatcccgcatcacttaatcttaaagtgatcagcgcatcggccgat
gaactcgttatacatgaacaacgccttgatttagtcgcaaaatcaggaaagtgcctctgg
agaggataa
DBGET
integrated database retrieval system
