Shewanella sp. LC6: FJD32_011940
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Entry
FJD32_011940 CDS
T11827
Name
(GenBank) thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
KO
K00166
2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:
1.2.4.4
]
Organism
shen Shewanella sp. LC6
Pathway
shen00280
Valine, leucine and isoleucine degradation
shen00640
Propanoate metabolism
shen00785
Lipoic acid metabolism
shen01100
Metabolic pathways
shen01110
Biosynthesis of secondary metabolites
shen01210
2-Oxocarboxylic acid metabolism
Module
shen_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FJD32_011940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FJD32_011940
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FJD32_011940
Enzymes [BR:
shen01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
FJD32_011940
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Motif
Pfam:
E1_dh
DXP_synthase_N
DUF6988
Exg3_C
Motif
Other DBs
NCBI-ProteinID:
QQK60143
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Position
2578958..2580136
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AA seq
392 aa
AA seq
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MSKATLNTDTVHRVGFLDKASLHIPILRILQADGTTYETAVLPVIDEALATKIYDTCVFT
RVLDERMLGAQRQGRISFYMTCTGEEAAIVGSVAALDQEDVILAQYREHAALRYRGFTTE
QFMNQMFSNEKDLGKGRQMPIHYGCAALNYQTISSPLATQIPQATGVGYSLKMQGKRNVA
VCYFGEGAASEGDFHAGLNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYG
MHTIRVDGNDMLAVLAATQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEA
KWQQHDPVKRFKLWLINKGWLAEADDAQRYEKYREEVLAAVKVAEKLPIPMLDEIIEDVY
DKPTPALKKQLSDLKEHIKKYPQSYPKSAGRL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaacactcaacactgatacagtgcaccgtgtcggcttcttggataaggca
tcgcttcacattcctatccttcgaattctacaagcagacggcactacctatgaaaccgcg
gttttgcctgtaatagatgaagccttagccaccaaaatttatgatacttgcgtgttcacg
cgagtactcgatgaacgtatgcttggcgcacagcgtcagggacggatcagcttctatatg
acctgcaccggtgaagaagccgcgatcgtcggtagcgtggccgcacttgatcaagaagat
gtgatcctcgcgcaataccgtgaacatgcagcgctacgttatcgcggctttaccactgaa
cagtttatgaaccaaatgttcagcaatgagaaggacttaggtaaaggtcgccaaatgcca
atccactacggctgcgcggcgttaaactaccaaaccatttcatcgccattggccactcaa
attccgcaagcgacaggtgtcggttatagcctgaaaatgcagggcaaacgtaatgttgct
gtctgttatttcggtgaaggcgctgcatcggaaggcgatttccatgccggattgaatatg
gcggcggtgttaaaatgccccgtgattttcttctgccgtaacaatggttatgccatttct
accccaaccgaagagcaatttgccggtaacggtattgccagtcgtggcgtgggttacggc
atgcacactattcgtgtcgacggtaacgatatgcttgcagtgttagctgcaactcaacaa
gcacgcgcctatgcgattgaacacaatgcccccgtgttgattgaagctatgacttatcgt
cttggcgcccactcatcttcagacgatccatctggttatcgctcaaaagaagaagaggcg
aaatggcaacaacacgatccggtcaaacgctttaagttgtggctgattaataaaggctgg
ttggccgaggccgatgatgcccagcgttacgaaaagtaccgtgaagaagtgttagccgcc
gttaaagtcgcggaaaaattacctatccctatgctggatgagattattgaagacgtgtac
gacaagccaacgccagcgcttaaaaagcaactgagcgatcttaaagaacacatcaaaaaa
tatccgcaatcctatcccaaaagtgcagggaggctataa
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