Shewanella sp. LC6: FJD32_012015
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Entry
FJD32_012015 CDS
T11827
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
shen Shewanella sp. LC6
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shen03016
]
FJD32_012015 (ttcA)
Transfer RNA biogenesis [BR:
shen03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
FJD32_012015 (ttcA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
QQK62151
LinkDB
All DBs
Position
complement(2594132..2595064)
Genome browser
AA seq
310 aa
AA seq
DB search
MPEELSKKQITRLNKLQKRLRREVGSAIADYNMIEDGDRVMCCLSGGKDSYAMLDILLNL
QQRAPVQFEIIAVNLDQKQPGFPEDILPAYLDSLNIPYHILEKDTYSIVKEKIPEGKTTC
SLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSDDGAN
VVIRPLAYCREKDLEEYAQLKKFPIIPCNLCGSQENLKRQAVKDMLNQWDRLYPGRIETI
FTAMQNTAPSQGVDRDQFDFVSLKRDPNAPMKGDVAEAELPAFDFLDIANNGHIDLDAAK
RINIVNVYEA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaattatcaaaaaaacaaattacccgtctgaataaattacagaagcgtctg
cgtcgtgaagtgggtagcgctatcgccgactacaacatgattgaagatggtgaccgagtc
atgtgctgcctaagtggcggtaaagacagctatgctatgctggatattctgctcaatcta
caacagcgcgcgcctgtacagttcgaaattattgccgttaatttagatcaaaagcagcca
ggtttccctgaagatatactgcctgcctatctagatagccttaatattccctatcacatt
cttgaaaaagacacttactcgattgtgaaggagaaaattcctgaaggcaaaaccacttgc
tcactgtgctctcgcctgcgtcgtggcactctctatggttttgcgcaacgaattggcgca
accaagatagctctcggtcatcacagagacgatattattgaaacgctattcctcaatatg
ttttatggcggtaagatgaaagccatgccacctaagttgctctcggacgatggcgcaaac
gtggttattcgcccacttgcgtactgtcgtgaaaaggatttggaagaatacgcacagctt
aaaaaattccccattattccttgtaatctctgtggctctcaggaaaacctcaagcgtcaa
gcggtgaaagacatgctcaatcagtgggatagactatatcctggccgtattgaaaccatt
ttcactgctatgcaaaatactgcaccttcacagggtgttgaccgtgaccaatttgacttt
gtatcgttgaaacgcgatcccaatgcgccaatgaagggtgatgtggccgaagccgaactg
cccgcctttgattttctcgatattgctaacaacggccatatcgatttagatgcggcaaaa
cgcatcaatatcgtcaacgtgtacgaagcgtaa
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