Shewanella sp. LC6: FJD32_016970
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Entry
FJD32_016970 CDS
T11827
Symbol
torC
Name
(GenBank) pentaheme c-type cytochrome TorC
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
shen Shewanella sp. LC6
Pathway
shen00680
Methane metabolism
shen01100
Metabolic pathways
shen01120
Microbial metabolism in diverse environments
shen02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
FJD32_016970 (torC)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FJD32_016970 (torC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shen02000
]
FJD32_016970 (torC)
Transporters [BR:
shen02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
FJD32_016970 (torC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cytochrom_NNT
TorC_3rd
Mtrc-MtrF_II-IV_dom
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
Cytochrom_c_NrfB-like
DHC
FdhE_C
Motif
Other DBs
NCBI-ProteinID:
QQK61020
LinkDB
All DBs
Position
3721618..3722796
Genome browser
AA seq
392 aa
AA seq
DB search
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESK
PYQELQETVHWSNHSGVRATCPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEA
KRLEMASREWKRFDRDNSLACKNCHNYNSMKWESMSPLAQKQMKRAAEIDQSCIDCHKGI
AHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
VLETKGKRIKIAIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPM
TGLKWQRVEAQIWTDKDYLLTELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQ
GMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggttaatcaacctctggcgcacactaaacaaacccacaaaagctctcacctta
ggcgctgtcagcatcagtgcttttatcatgggcatcatcttctggggcggatttaacacc
gcattggaagccaccaacaccgaagccttctgtattagctgccacagtatggaaagcaag
ccttaccaagagttacaggaaactgtgcattggtcgaatcattcaggtgtgcgcgccacc
tgccccgactgtcacgtgccccacaactggagccgtaagattgcccgtaagatggaagct
tcccacgatgtttggggctggttattcaacacggtcaacacccctgaaaaatttgaagct
aaacgtctcgaaatggcgagccgcgaatggaaacgtttcgatcgcgacaattcactggcc
tgtaagaactgccacaactacaactcgatgaagtgggaaagcatgtcaccactggcgcaa
aaacagatgaaacgtgccgccgaaatcgaccaaagctgtatcgattgccacaaaggcatt
gcccaccatctacctgaaatgggcacggcccgtgcacctgaactcatcgccgaagtcggc
gctggcgtcagctcagtcgaaaccaaccaaacctactacagtgccctaactaagcctctg
ttctttagtgaaaaaggtgatgttgaagccggtaccttaaacgtcgcgactaaagtcaaa
gtgctcgaaactaaaggtaagcgcatcaaaattgctatcgatggctggcgtaagaaaatc
ggcgcaggccgcgtgatctacatggactttggcgtaaacattctgtcggcacagttaagc
aaagatgcagcagaaaccgaaggtgttatccaaacctttgaagagaaagaagacccaatg
acaggcctgaaatggcaacgggttgaagcccaaatctggaccgataaagattacctgctc
accgagctgcaaccactctggggctatgcccgcgataccttccgctcaagctgtagtgtg
tgccatacccagccagatgaagcgcatttcgatgccaatacctggccaggcatgttccaa
ggcatgttggccttcgtgaacatggaccaagacactcaagcgctggtgcagaaatatctg
caagaacattcgtcaaccttcgtgaaaaaagagcactaa
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