Shewanella sp. LC6: FJD32_023000
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Entry
FJD32_023000 CDS
T11827
Symbol
tnpA
Name
(GenBank) IS200/IS605 family transposase
KO
K07491
REP-associated tyrosine transposase
Organism
shen
Shewanella sp. LC6
Brite
KEGG Orthology (KO) [BR:
shen00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
FJD32_023000 (tnpA)
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Motif
Pfam:
Y1_Tnp
Motif
Other DBs
NCBI-ProteinID:
QQK62278
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Position
pSX1_LC6:complement(41219..41635)
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AA seq
138 aa
AA seq
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MEIESDLRHGRHCVFKMHVHLVFVTKYRRNVFTKEVLDDLKIFFEKVCLDFESELVEFDG
EDDHVHLLVNYPPKVAVSNLVNSLKGVSSRMIQKKNYPSIKKKLWGGALWSPSYFAGSCG
GAPIEIIRQYIEQQQTPA
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaaagcgatttaaggcatggcaggcattgtgtttttaaaatgcacgttcat
ttggtctttgtaacaaaataccgacgaaatgtctttaccaaagaagtgctggatgatcta
aaaatcttttttgaaaaggtctgtcttgattttgaatcagagctggttgagttcgacggt
gaagacgaccatgtgcatttgttggtgaattacccgccgaaggtggccgtgtcgaatctg
gttaacagtctcaaaggtgtatccagccggatgatccaaaaaaagaattacccttcgatc
aaaaagaaactctggggaggtgcgctctggtcgcccagttattttgcggggagctgtggt
ggtgcgccaattgagatcatccggcagtatattgagcagcaacaaactccggcgtag
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