Shewanella sp. LC6: FJD32_025005
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Entry
FJD32_025005 CDS
T11827
Name
(GenBank) conjugal transfer protein TraB
Organism
shen Shewanella sp. LC6
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrbI
EntA_Immun
NOCA1_mid
bZIP_1
Wtap
Rab11-FIP3
CCDC61_coil
CEP135_TSGA10_CC
TMF_DNA_bd
Rv0250c
CCDC172
IPGAL2_N
TssO
CEP152_CC1
DUF1151
DUF677
Filament
IFP_35_N
YGR130C_C
PTX3_N
YabA
FlaC_arch
DUF29
SPATIAL
CHD_PDZ-protease
CENP-F_leu_zip
CCDC3_C
Motif
Other DBs
NCBI-ProteinID:
QQK62632
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All DBs
Position
pSX2_LC6:45406..46722
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AA seq
438 aa
AA seq
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MIKRFWTELDPKKKRWVAIAGGLFVLFAVVTMFSGEPKKEEKRGRQETIKHVLTDKNTRE
IGIDSLSADVKMVSRENSDLKKELEKVKRELEQTKDTAGKSSDVGREISRLRQDLDRLTQ
KNMELSKKVETGEAGGKTASSTGDARADVNGTSDGEGQLMDKKLDYKDPASFFRDAPLPD
SKGGAPATGKGDGRDATKPGIQIVSYSQKSPEVDVKDDKDDESLYLPSGSILTGVLINGM
DAPTSQGARRDPFPSTLRIQKEAILPNRFRADVRECFLIVSGYGDLSSERAYLRGETFSC
VREDGGVIEARLDSYAVGEDGKAGVRGRVVSKQGQIIAKSLMAGFLGGVSEAFDVNPVPV
VNTNPGSNTQYQSVFSEQMFQGAAAKGASKALDRIAQFYIDMAEGIFPVIEVDAGRQVDI
IVTKGTKLQIRSNGGNKK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgattttggactgagctagaccccaaaaagaaacgctgggtagcaattgct
ggtggtctattcgttctttttgcagtagtgacgatgttctctggtgagccgaagaaggaa
gaaaaacgtggtaggcaagaaaccatcaagcatgttcttacagacaaaaatacccgtgag
atcgggatagattcgctgtctgccgatgtgaagatggtgtctcgtgagaattcagacctt
aaaaaggagctggagaaggtcaaaagagagctggagcaaacaaaggatactgccggtaaa
tcaagcgatgttggtagagagatttctcgtctacgccaagaccttgaccgtctaacccag
aaaaacatggagctgtctaagaaggttgaaactggtgaggctggcggaaaaacagcttct
tcaacaggggatgccagagccgatgttaatggcacatcagacggtgaaggtcagctcatg
gacaaaaagctggactacaaagatccggcatcatttttccgtgacgcaccactcccggac
tcgaagggtggagctccagcaacaggcaaaggtgatggccgtgatgccacaaaaccaggc
attcagattgtgagctactcacagaagtccccagaagttgatgtgaaagacgacaaagat
gatgagtccctctatctgccgtcaggttccatcctgacaggtgtacttatcaacggtatg
gatgcgcctacttcccagggggcccgacgagatccattcccttcaactctacggattcag
aaagaagccatattgcccaatcgtttccgtgcggatgtcagagagtgtttcctgattgtt
tcaggctatggcgaccttagttctgaacgagcctacctacgcggtgagacattctcttgt
gtcagggaagacggcggcgtgattgaagcgaggcttgattcttatgcggtgggtgaggac
ggaaaggctggtgttcgaggccgcgttgtatcgaagcaagggcagattattgccaagagc
ttgatggctgggttccttggtggagtgtctgaggcctttgatgtcaaccctgtaccagtt
gttaacactaaccctggctcaaacacccagtatcagtcagttttctctgaacagatgttt
cagggggctgcggcgaagggagctagtaaggcgcttgatcgtatcgctcaattctacatc
gacatggccgaaggtatcttcccggtcattgaggtcgatgctggccgccaagtagacatc
attgtgacaaaaggcaccaagttacaaattcgttccaatgggggcaataagaaatga
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