Shewanella sp. Pdp11: AYJ58_00685
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Entry
AYJ58_00685 CDS
T11329
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00470
D-Amino acid metabolism
shep00550
Peptidoglycan biosynthesis
shep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYJ58_00685
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYJ58_00685
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shep01011
]
AYJ58_00685
Enzymes [BR:
shep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AYJ58_00685
Peptidoglycan biosynthesis and degradation proteins [BR:
shep01011
]
Precursor biosynthesis
Amino acid ligase
AYJ58_00685
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Paralog
Gene cluster
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Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
DAO
B12-binding
NAD_kinase
Motif
Other DBs
NCBI-ProteinID:
AUD58089
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Position
complement(149530..150849)
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AA seq
439 aa
AA seq
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MQNQYSHIVLGLGATGLSVVRYLCGKGITPLVMDSRRQPPGAETLATSFPDVKLISGGFD
CRYLVQATQIIISPGIATYTPEVRAAVDMGIEVIGDVELFAREIADRKPCVIGITGSNGK
STVTTLVGEMAREAGIAVAVGGNIGVPALDLLHENADLFVLELSSFQLETTHSLKCVVAT
CLNISEDHMDRYSDIAAYREAKLRLYKQSRAVLFNRDDKLTVPPEPMNQNSFGLAAPEAD
EWGISDSKIYHGSSEIMPITEVSLIGSHNHANLLAAMALVDAVGVDKQVMAKVARSFTGL
SHRCEVVGIKNGVTYVNDSKATNVGATVAALDGLSDHLGDIILIAGGDGKGADFKPLGVA
LAKVTHLITLGRDGKKIAALKDGAVKVDTMAAAVTKAAELATSGDIVLLSPACASLDMYS
NFMARGDDFRNLVEQLNGE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcagtattcacacatagtgttaggtttaggggcaacgggtttgtccgtggtg
cgctatttgtgtggaaagggcattacgccattggtgatggacagtcgtcggcagcctccg
ggcgccgaaacattagcgacgtcttttcctgatgtgaagctgatttctggcggattcgat
tgccgttatctcgtgcaagcgacgcagattattatcagtccaggcattgccacttatacc
ccagaggtgcgtgccgctgtggatatgggcatcgaagtgattggcgatgttgagctattt
gcccgtgaaattgctgaccgtaaaccttgcgttattggtattactggctctaacggtaaa
tcaacggtcactacgctggtaggcgaaatggcaagggaagcaggtatcgccgttgccgtc
ggtggcaatatcggtgtgcctgcgctggatttactgcatgaaaatgccgacctatttgtg
cttgaattgtcgagctttcaactggaaaccacccacagccttaagtgtgtagtggcgacc
tgtttgaatatcagcgaagaccacatggacagatacagcgatatcgctgcctaccgcgaa
gctaaattacgtttatacaaacaaagccgcgccgtgctgtttaatcgcgacgataaactg
accgtaccgccagagccaatgaaccaaaacagttttggtttagctgcgcctgaagcggac
gaatggggcatcagcgacagcaagatttatcacggcagcagcgaaatcatgccgatcaca
gaagtctccctgattggcagccataaccatgccaacttactcgcagcaatggcgcttgtg
gatgctgtgggcgttgataaacaggtgatggcaaaagtggcgcgtagctttaccggctta
tcccatcgctgtgaagtggttggcattaagaatggcgtgacctatgtcaatgactcgaaa
gcaacaaacgtcggtgccaccgttgccgcgctggatggtttgagtgatcacttaggcgat
attattttgattgctggcggcgacggcaaaggtgctgattttaaacctttaggcgtggcg
ttagcgaaagtaacacacctcattaccttaggtcgtgatggcaaaaagattgccgcgtta
aaagacggcgcggtgaaggtcgacactatggcggcagcggtaacgaaagccgctgaattg
gcaacttctggcgatatcgttttattgtcaccagcctgcgccagtttagacatgtacagt
aactttatggctcgaggtgacgattttagaaaccttgtggagcaacttaatggcgagtga
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