Shewanella sp. Pdp11: AYJ58_01520
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Entry
AYJ58_01520 CDS
T11329
Name
(GenBank) c-type cytochrome biogenesis protein CcmF
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_01520
Transporters [BR:
shep02000
]
Other transporters
Others
AYJ58_01520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
ResB
DUF2651
Motif
Other DBs
NCBI-ProteinID:
AUD58245
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All DBs
Position
complement(328581..330560)
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AA seq
659 aa
AA seq
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MIPELGHFALIIGVAFAFLLISVPLIGVARKDQYLVRYAWPLTYGMFFFITVSVVVLAYS
FAVDDFSVAYVAHHSNSQLPIFFKISAVWGGHEGSLLFWVFALSTWAAAVALFSKGLEEV
FTARVLAVLALIVIGFSLFMLLTSSPFERLFPIPAEGRDLNPMLQDVGLIFHPPMLYLGY
VGFSVSFAFAIAALMSGRLDSAWARWTRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTS
VHSFAADPSRGMFILLLLGLAIGGSLTLFAFRASEMSSPARFELKSKETMLLVCNVLLTV
AAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLVLFGFMGIGPIIRWKKSKAGE
LKRQLLIPAMIAAAIGIVTPFIVDGVFNTWVAFGIAAAAWIILATARAAYNMVKSKEGDI
SISRMGRSQLGMIFAHLGIAVSVIGATMVSNYSIEKSVRMGPGISQELAGYTFKYLETKN
VVGPNYTAMQGQIEVYKGDELLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPI
TSTEFAVRLNYKPFVRWLWFGAIFMMIGGFFAASDKRYRAKVTAAVAPLANKAKLATAQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagaacttggacactttgcgctgataataggggtggcttttgccttcttatta
atcagcgtccccctaataggtgttgcccgtaaagatcaataccttgttaggtatgcttgg
ccgttaacgtacggaatgttcttttttatcactgtatctgttgtcgtactggcttatagc
tttgccgtcgacgacttctccgtcgcttatgtggcacatcactctaattctcagttacct
atcttctttaagatatcggccgtatggggcggtcatgaagggtcactgttgttctgggtg
tttgctttatcgacttgggctgcagcggttgccttatttagtaaaggtttagaggaagtg
tttactgcgcgtgtactggcagtattagcgctgatcgtgattggctttagcttattcatg
ttacttacttctagtccattcgaacgtttgttcccgatccctgccgaaggtcgtgacttg
aacccaatgctgcaggatgtgggattaatcttccatccacctatgctgtacttaggttat
gtgggtttctcagtgagctttgcatttgcgattgccgcgctgatgagcggtcgtctcgat
tctgcatgggctcgttggacgcgtccttggaccttagccgcttggatcttcctaacagga
ggtatcgcgttaggttcttggtgggcatattatgaattaggctggggcggttggtggttc
tgggatcctgtagagaacgcttctttcatgccttggttagtgggtactgcgctggttcac
tctttgattgtgaccgagaaacgcggcgccttccgcaactggacggtattactgtctatc
ttcgctttctctttaagtttgcttggtacatttattgttcgctctggcgtattaacctca
gtgcattcattcgcagctgatccaagccgcggtatgtttattctgttgttacttggttta
gcgattggtggttcattgacactgtttgccttccgcgccagtgaaatgagcagcccagcc
cgtttcgagctgaaatctaaagaaaccatgctactggtctgtaatgtgttactgaccgtt
gccgcaggtactgtgctattgggtacgctctatccattgctcatcgatgcgctcggcatg
ggtaaaatctctgtaggacctccatacttcaacgctgtgtttgtgcctatcgtattagtc
ttatttggctttatgggtattggtccaattatccgttggaaaaaatcgaaagcaggcgag
cttaagcgtcagttattgatccctgcaatgattgctgcggctatcggtattgtgacgcca
tttatcgtcgatggtgtattcaatacttgggttgcctttggtatcgcggcagcggcttgg
attatcctggcgacagctagagcggcctataatatggtcaagtcgaaagaaggtgatatc
agcatcagccgtatgggccgtagccagctgggtatgatcttcgcgcatcttggtattgct
gtatctgtgattggtgccactatggtgtcgaattactccattgagaaaagtgttcgcatg
ggaccaggtatcagccaagaacttgcgggttatacctttaagtatctcgagactaaaaac
gtagtgggtcctaactacacagcaatgcaaggacagatagaagtctacaaaggtgatgag
ttgctgacattactcaagccagaccgtcgtcaatataatgtgcgtactatggacatgaca
gaagcggggatcgactggggtctattccgtgacttgtatgtgaccatgggcgatccaatt
actagcactgaatttgcggttcgtttgaactacaagccattcgtgcgttggttatggttt
ggggcaatttttatgatgattggtggattcttcgcggcatcggataaacgttaccgtgcg
aaagtcactgcagccgtcgcaccgttagcgaataaagcaaaattggcaacggctcaataa
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