Shewanella sp. Pdp11: AYJ58_02675
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Entry
AYJ58_02675 CDS
T11329
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00071
Fatty acid degradation
shep00280
Valine, leucine and isoleucine degradation
shep00310
Lysine degradation
shep00362
Benzoate degradation
shep00380
Tryptophan metabolism
shep00410
beta-Alanine metabolism
shep00640
Propanoate metabolism
shep00650
Butanoate metabolism
shep00907
Pinene, camphor and geraniol degradation
shep00930
Caprolactam degradation
shep01100
Metabolic pathways
shep01110
Biosynthesis of secondary metabolites
shep01120
Microbial metabolism in diverse environments
shep01200
Carbon metabolism
shep01212
Fatty acid metabolism
Module
shep_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AYJ58_02675 (fadB)
00650 Butanoate metabolism
AYJ58_02675 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AYJ58_02675 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AYJ58_02675 (fadB)
00310 Lysine degradation
AYJ58_02675 (fadB)
00380 Tryptophan metabolism
AYJ58_02675 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AYJ58_02675 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AYJ58_02675 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AYJ58_02675 (fadB)
00930 Caprolactam degradation
AYJ58_02675 (fadB)
Enzymes [BR:
shep01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AYJ58_02675 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AYJ58_02675 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AYJ58_02675 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AYJ58_02675 (fadB)
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Other DBs
NCBI-ProteinID:
AUD58452
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Position
576811..578961
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQDSNIKALVLTSS
KDTFIVGADITEFLGLFAQDDVVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALK
VGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKALIGIFLNNQFVK
GKAKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKLL
SAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKIKAQVLAEVEGYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMADGFPDRMGKSGTDAIDVMFENKRLGQKNGKGFYVYSVDSRGKP
KKDIDPTSYSLLKDAFGELKAFEADDIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRTLAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaaccctcgcctcgctcgat
gcggcattagacagcatcaagcaagattccaatatcaaagcgttagtgctgacctcaagt
aaagatacctttattgtgggcgccgacattaccgaatttttaggcctgttcgcacaagat
gacgtcgtattgctctcttgggttgaacaagccaacgcagtcttcaacaaactcgaagac
ttgcctttcccaaccgcatcagcaatcaaaggctttgccttaggtggcggctgtgaaacc
attctggcaaccgatttccgtatcgcagacaccacagccaaaatcggtttacccgaaact
aaactcggcatcatcccaggttttggcggcacagttcgtctgccacgtgtgattggtgca
gataacgcacttgagtggatcacgaccggtaaggaccaacgcgctgaagatgcactgaaa
gtcggcgctgttgatgccgtggttgcaccacaagcgttagaagctgctgcgattcaaatg
ctcaaagatgctgttgctgaaaagctggattggcaagcacgtcgtaaccgtaaactgtct
gcgctaacactgccaaaacttgaagctatgatgtcattcaccacagccaaaggcatggtg
tttgcggttgcgggtaaacactaccctgcaccaatggctgctgtaagcgtaattgagcaa
gcatcgactaaaggtcgtgctgaagcattacaaatcgaacatcaagcctttatcaagctg
gctaaaaccgacgttgctaaggcacttatcggtattttccttaataatcaatttgttaaa
ggtaaagcgaagaaagccggcaagttagcgaaagaagtcaacaacgcggccgtattaggc
gcaggcattatgggcggcggcatcgcttaccaaagcgccagcaaaggcacaccaattgtg
atgaaagacatcgctcagcctgccttagatttaggcctcaatgaagccgccaaactgctg
tctgcccaagtcgcccgtggccgttcaacgccagaaaaaatggccaaagtgctgaacaat
atcacgccttcattagattatgccgcgattaaacacagtgatgttgtcgttgaagccgtt
gttgaacatccaaaaatcaaagcacaggttttagccgaagttgaaggctatgtaagtgaa
gatgcaattatcgcgtcaaacacttcaacaatttcaatcaacttgctcgctaagagcatg
aagaaacctgaacgtttctgcgggatgcatttcttcaatccagtgcacaaaatgccgttg
gtcgaagttatccgtggcgagcacagctctgaagaaaccatcgcctctgttgtggcttat
gccagcaaaatgggcaaaaccccaatcgtggttaatgattgccctggcttcttcgtaaac
cgcgtactcttcccttactttgccggctttaacggcttacttgcagaaggtggcgacttt
gccgcaatcgacaaagtgatggaaaaacaattcggttggccaatgggtcccgcttacctg
ctcgacgttgtcggtttggacacaggtcatcacgcccaagccgttatggctgatggtttc
cctgatcgcatgggtaaatctggtactgacgcgattgatgtgatgtttgagaacaaacgt
cttggccagaaaaatggcaaaggtttctatgtctattcagtcgatagccgtggcaaaccg
aagaaagatatcgatccaaccagctacagcctgttgaaagatgcctttggcgagttaaaa
gcttttgaagccgatgacattattgcccgtactatgatccctatgatcatcgaaaccgtg
cgctgtttagaagaaggcattgtcgcatcgcctgccgaagcggatatgggcctagtttat
ggcttaggtttcccaccattcagaggcggcgtgttccgttacttggataccatgggtgtc
gcaaattttgtggccttagcagacaaatatgctcacttgggcggtctgtatcaagtcaca
gatgcgatgcgcacattagcagccaataacggtagctactaccaagcctaa
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