Shewanella sp. Pdp11: AYJ58_02820
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Entry
AYJ58_02820 CDS
T11329
Name
(GenBank) chromosome partitioning protein ParB
KO
K03497
ParB family transcriptional regulator, chromosome partitioning protein
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shep03000
]
AYJ58_02820
03036 Chromosome and associated proteins [BR:
shep03036
]
AYJ58_02820
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shep04812
]
AYJ58_02820
Transcription factors [BR:
shep03000
]
Prokaryotic type
Other transcription factors
Others
AYJ58_02820
Chromosome and associated proteins [BR:
shep03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AYJ58_02820
Cytoskeleton proteins [BR:
shep04812
]
Prokaryotic cytoskeleton proteins
MinD / ParA class of bacterial cytoskeletal proteins
AYJ58_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ParBc
ParB_dimer
HTH_ParB
Xre-like-HTH
DUF7119
HTH_Crp_2
HTH_37
HTH_3
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AUD58479
LinkDB
All DBs
Position
612308..613186
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AA seq
292 aa
AA seq
DB search
MTLKKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSP
EALEELAHSIRNQGIIQPIVVRQVANDMYEIIAGERRWRAAQLAGLNKIPCIVKQVPDEA
AVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNE
PVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKQAET
TTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKIH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaaagaaaagaggattaggcaaagggttagatgccctactgagtaacagccat
gccgccagtaaaaaacacactgacgaagctaatgttgtcgataaaaaagaagagcttatc
catctcgatttagacttattacaaccgggtaagtatcaacctcgtaaagacatgtctccc
gaagcgttggaagaactggcgcactctatccgcaatcaaggcattattcagcccatcgtt
gtgagacaagtggcaaacgacatgtatgagatcattgcgggtgaacgtcgttggcgtgct
gcgcaacttgctggcttgaataaaatcccctgcatagtcaaacaagtacccgatgaggcc
gccgttgctatcgctttgattgaaaacatccagcgtgaagatttaaatgccatggaagaa
gccatagcattacaacgtttaatgcaagaatttgaactgactcaccaacaggttgccgat
gttgtgggaaaatccagagcgagtgtatctaacttgttacgtttaaacggcttaaatgag
ccagtaaaacgtctactcgagtatggcgacatcgatatgggtcatgctcgcgctttgtta
gcaattgagggagaagaacaaacaaatcttgcgagattagtggccgctaaggaattaacc
gttcgcgaaactgaacgattaattaatcaaaccttaaatccgcctaaacaagccgaaact
acgactaaagatcaagatgtttgtcgtttagagcagcagttaattgaaagattaggtgcc
aaggtttctatcgctcatagcagtaagggcacaggtaaaattgtaattaactatcagaat
ctggctgaattagacggaattcttagtaaaattcattaa
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