Shewanella sp. Pdp11: AYJ58_04280
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Entry
AYJ58_04280 CDS
T11329
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shep03000
]
AYJ58_04280
Transcription factors [BR:
shep03000
]
Prokaryotic type
Helix-turn-helix
GntR family
AYJ58_04280
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_36
HTH_11
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AUD58752
LinkDB
All DBs
Position
956849..958225
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AA seq
458 aa
AA seq
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MTKVLAYKQVYQRIHTAILQGILKSGERLPSARTLAKEMGVARGTVEEGYAILKAEGYIE
SKGQAGTVVSRHFFELAKVQTIQLNTRQPGFHTEIETSVVLPFQLGIPALDAFPRQAWSR
MAARCARNIQMDDLIYPSVYGSPQLRIAIAQYLQLSRGVKCEPTQVFITSGYVHSINWIA
HVLLTPQANVAVEDPGYPLTRKILANQNLNIVPIVVDKEGINLPPNTQADAVIVTPAHQS
PTCVSLSLQRRQELLSWAETNQSWIIEDDYDGEYRHTGQPLPALKSLDNFDRVIYSGTFS
KVLFPSLRMAYIVVPKSKVSAFEQCSELYAGNVSGLTQACVLAFMQEGHLSRHIQRMKNL
YRERRELTARVFKQVLGDKVSIEPQPGGMYMMVKLTDPNIDDAELANKMMKAGLFAQGLS
QWSSRPVHPSLILSFTNISTEEECRTLVSRFKDILGQC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagtcttggcctataagcaagtctatcaacgcattcatactgcgattttgcaa
gggatactcaagtccggtgagcggctaccctctgctcgtacccttgccaaggaaatgggt
gtcgcacgcggaacggtagaggaaggttatgccatcttaaaagccgaaggctacattgag
tctaaaggccaagctggtactgtggtcagtcgacattttttcgagctagctaaggtccaa
accattcagctaaacactcgccagcccggtttccacactgaaatagaaacttctgtcgta
cttccctttcagctaggtattccagcgttagatgcctttccaaggcaagcttggtcaaga
atggcggcaagatgcgcccgtaacatccagatggatgatctgatttatccttctgtttat
ggtagcccgcaactcaggatagccatagcgcagtatttacagctttcccgaggggtaaaa
tgcgagcccacccaagtgtttatcacctctggatatgtccattccattaactggatagcc
catgtgctgctaacgccacaagccaatgtcgccgtagaagatcccggttacccactgact
cggaaaatcttagcgaatcagaatcttaatattgtgccaatcgttgtcgataaagaaggc
ataaatttaccgcccaacacccaagcggacgcggtgattgtgaccccagctcaccagagt
ccaacttgcgtgtccttatcgctccaacgtcgacaggaattactcagttgggcagagact
aaccaaagttggattattgaagatgattatgacggtgagtatcgccatacaggtcagccg
ctaccggcgttaaaaagtttggacaactttgatagggttatttattcaggcaccttcagt
aaggtgcttttccccagtttgcgaatggcttatatagtggtgcccaaaagcaaagtgtca
gcgttcgagcaatgctctgaactgtatgccggcaatgtttcggggcttacccaagcttgc
gtgttggcttttatgcaggaaggccatctttcccggcatattcaacggatgaaaaatcta
tatagagagcgcagagaattaaccgccagagtctttaaacaagtgttaggcgataaggta
tcgattgaaccacaaccgggtggaatgtatatgatggtaaaattgaccgaccccaatatt
gatgatgcagagctggccaacaagatgatgaaggcagggttatttgctcaagggttatcg
caatggtcatcaagacccgttcacccaagcttaattttaagtttcaccaatattagtact
gaagaagaatgtcgaaccttagtttctcgcttcaaagatattttagggcaatgctaa
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