Shewanella sp. Pdp11: AYJ58_04350
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Entry
AYJ58_04350 CDS
T11329
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_04350
01504 Antimicrobial resistance genes [BR:
shep01504
]
AYJ58_04350
Transporters [BR:
shep02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AYJ58_04350
Antimicrobial resistance genes [BR:
shep01504
]
Gene variants
Tetracycline resistance genes
Transporters
AYJ58_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
AUD58766
LinkDB
All DBs
Position
968837..970330
Genome browser
AA seq
497 aa
AA seq
DB search
MSPSLLAILPLLLTLTLALFLRRTLVALGVGIVSGALLIAQFDPLQTGRYLLDIGVKQFY
AQGAWQAWHLNVLLAMLLLGSMTQLLARGGAVGQFGDWLYSRIRTERQARLGVVFLGWLV
FIDGIFSCLAVGHVCQPLSQRYGIRHEQLAYLVDSNASPLCALLPFSSWGPYVMALIAGI
SFLPESPLEAFIDVALFNFYAIVTLGLSVLVAWYGVGFRSFVAPIEAKSSNAVEARGNPW
LLAIPMLTLLLASVGLTLWSGAQQVSSWDVSLWLAKADIGASMRDACLLATLVTLIMLSL
SGRRLTALVGDLSHGVRIIAFAIAILLCTWMIGAVIQDLGVAKLLAAWAKSYLSPHLLVA
GMFLLCAIMAFATGSSWGTFAIMIPIGAEIAHNLDPHLLLPVLSAVMAGSVFGDHCSPIS
DTSVLSATSSGCAPHDHVVTQLPFALIAACSALVGFQLVNLAVATPLVWLAVVSCGLGLF
ALMARFYSPWPKLAAQT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctagtctgctcgccatactcccactactgttgaccttaaccttagccctgttt
ttacgtcgtacactggtggcgttaggcgtcggcatcgtctctggcgcgctattgatcgcc
caatttgacccactgcaaactgggcggtatttgcttgatatcggcgttaaacaattctat
gcccaaggtgcttggcaagcgtggcacctcaatgtgctattggccatgttgctgctaggc
agcatgacgcagttattagcacgtggcggcgccgtgggtcagtttggtgattggctttat
agccgtatccgcactgaacgtcaggcgcgtctgggcgtcgttttccttggttggttagtg
tttatcgatggaattttcagttgccttgccgtcggccatgtttgtcagccattgagccag
cgttatggtattcgtcatgagcagctcgcctatttggtcgattccaacgcttcacctctg
tgtgcgctattgcctttctccagctggggcccctatgtgatggctctgattgcggggatc
agctttttgcccgagtcaccgctggaagcctttatcgatgtggctttgtttaatttttac
gccatagtgaccttaggtttatccgtgcttgtcgcttggtatggtgtggggtttcgctct
tttgttgcccctatagaggccaaatcctcaaatgcggtcgaggctaggggaaatccttgg
ctgcttgctattcctatgctgacgctgttattggcttcagtgggattaactttgtggtcg
ggggctcagcaggtctcgtcttgggatgtgtcgctctggctggctaaggctgatattggt
gcctctatgcgtgatgcttgtttattggcgaccttggtcactctgattatgttgagcttg
tctgggcgacgtttaacggcgttagtgggggatttgagccacggtgtgcgtattattgct
ttcgccattgcgattttgctctgtacttggatgattggcgctgtgatccaagatcttggc
gtggcgaaattgttagctgcttgggctaagtcttatctttctccgcacttgctggtggcg
ggcatgtttttactctgcgcgattatggcttttgcgacgggttcaagctggggcacattt
gcgattatgatcccgattggcgctgagattgcccataatttagatcctcatctgttattg
cctgtattgagcgctgtgatggcgggatcagtttttggcgatcactgctcgcccatctca
gataccagcgtgctcagtgcgaccagttcaggttgcgctccccatgaccatgtggtgact
cagttgcctttcgcgttaatcgcggcgtgttcggccttggtaggattccaattagtgaat
ttagctgtggcgacgccgttagtgtggttggccgtggtgagctgtggtctcggtttattt
gccttgatggcacgtttctactcgccttggcctaagttagcggcgcagacataa
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