Shewanella sp. Pdp11: AYJ58_04440
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Entry
AYJ58_04440 CDS
T11329
Name
(GenBank) transcriptional regulator IlvY
KO
K02521
LysR family transcriptional regulator, positive regulator for ilvC
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shep03000
]
AYJ58_04440
Transcription factors [BR:
shep03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AYJ58_04440
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
DUF8048
MarR
GntR
HVO_A0261_N
HTH_24
HTH_23
Fe_dep_repress
HTH_28
PrpR_N
HTH_Tnp_ISL3
TnsD
HTH_Crp_2
Mga
COX2
Motif
Other DBs
NCBI-ProteinID:
AUD58782
LinkDB
All DBs
Position
complement(995470..996342)
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AA seq
290 aa
AA seq
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MDIRTLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLLERDNRSVTLTHA
GREFKLFAEQTLNHWSTLKHSIDLKQDVLRGRLNLYCSVTAAYSHLPGLLDLFRQEHPFV
EIALTTGDAANALAEVQQNRADIAIAALPDPFPSSLHFAKIDDVPLSIIAPTIRCAVQQQ
ISQTPIDWSSVPFIIPDHGPGRRRADNWFKQMGISPNIYAQVSGQEAIASMVALGCGVSM
SPEVVINNSPVRDRIQLLASPVAIPPFELGCCCKVKRLDDPIVNAFLDVI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgtaccctcaaattgtacctgcacttatgtgacagtttgcacttcgccaag
accgcggagcagatgcatgtgagcccatcgaccttaagccgagccctgcaaagattagaa
gaggaagtgaacgctaagctgttagagcgggataatcgcagtgtgaccttaacccacgcg
ggacgcgagtttaagctatttgccgagcagactttgaaccattggagcacgctcaagcac
agtatcgatctcaagcaggacgtactgcgcggtcggttaaatctgtattgctcggtcacc
gccgcctacagtcatttaccgggtttattggatttattccgccaagaacatcccttcgtc
gaaatcgccttaaccacgggagatgcggcgaacgcgctggccgaagtgcagcagaatcgc
gccgacatcgccatcgccgccctgcccgatccgtttccgagcagcttgcactttgccaaa
atcgacgatgtaccactgtcgatcatcgcgccgactatccgctgcgcggtgcagcagcaa
attagccaaacgcccatcgattggtcgagtgtgccctttatcattcccgaccacgggccc
ggacgtcgccgcgccgataactggttcaaacaaatgggcatcagccctaatatttacgcc
caagtgtcgggccaagaagcgatcgcctctatggtggcgttgggctgcggcgtgagtatg
agcccagaagtggtaatcaataacagcccagtgcgggatcgcattcagttactcgcttct
cccgttgcaataccgcccttcgagttaggttgctgctgcaaagtaaagcggctcgacgat
cccatagtcaatgcgtttttggatgtgatttaa
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