Shewanella sp. Pdp11: AYJ58_04670
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Entry
AYJ58_04670 CDS
T11329
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shep03036
]
AYJ58_04670 (xerC)
Chromosome and associated proteins [BR:
shep03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AYJ58_04670 (xerC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AUD58821
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Position
1067772..1068692
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AA seq
306 aa
AA seq
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MSRQTGEVSALNTQWLQTFERYLSTERQLSAHTVRNYLFELNRGSDLLPEGVHLLNVSRE
HWQQVLSKLHRKGLSPRSLSLCLSAVKQWGEFLLREGVIELNPAKGLSAPKQAKPLPKNI
DVDAISHLLDIEGTDPLSLRDKAMMELFYSSGLRLAELAALNLSSVQYDLKEVRVLGKGN
KERIVPVGRLAITALQNWLNCRKQIPCEDDALFVTEKGKRLSHRSIQARMAKWGQEQALS
VRVHPHKLRHSFATHMLEASADLRAVQELLGHANLATTQIYTSLDFQHLAKVYDNAHPRA
KKTQDK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcaaacaggcgaagtgtcggcgcttaatactcaatggttacaaacctttgaa
cgctatttgagtaccgagcggcagttgtcggcccatacagtacgtaattatctttttgag
cttaatcgcggaagcgatctcttgcctgaaggcgtgcatttactcaatgtgagccgcgag
cattggcagcaagtattgtctaaattgcaccgcaaaggcttaagcccacgctcgctttcc
ctgtgtttatcggcggtaaagcaatggggtgaatttttgctgcgcgaaggcgtgattgag
cttaatcccgcgaaaggcttaagtgctcctaaacaagccaaaccgctgccgaagaatatc
gatgtcgatgccatcagtcatttactggatattgaaggtacagatccgctgagtctgcgg
gataaagccatgatggaattgttttattctagtggcttacgtttagcggagctcgccgcg
cttaatttatccagtgtgcaatacgatttgaaagaagtgcgagtcttaggtaaaggcaat
aaggaacgtatcgtccctgtcggtcgtttagcgattactgcgctgcaaaattggcttaat
tgccgaaagcagatcccctgtgaagatgacgccttatttgtgaccgaaaagggtaagcga
ctctcccatcgtagtattcaagcgcggatggcgaaatgggggcaagaacaggcattatcg
gtgcgcgtgcatccacataaactgcgccattcctttgccactcacatgttagaagcgagc
gccgatctgcgggcggtgcaagaattattgggccatgcgaacctagcgaccacgcaaatt
tataccagtttggatttccaacacttagctaaggtgtatgataacgcccatcctagagcg
aagaaaacacaggataaataa
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