Shewanella sp. Pdp11: AYJ58_04800
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Entry
AYJ58_04800 CDS
T11329
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shep02044
]
AYJ58_04800
02035 Bacterial motility proteins [BR:
shep02035
]
AYJ58_04800
Secretion system [BR:
shep02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AYJ58_04800
Bacterial motility proteins [BR:
shep02035
]
Pilus system
Pilus assembly proteins
AYJ58_04800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
AUD58847
LinkDB
All DBs
Position
complement(1092890..1094161)
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AA seq
423 aa
AA seq
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MATATTTRKPRTKKAEQKSQPKIYTFEWKGVNRDGKKTAGELRGATAAEIRSQLKSQGVN
PKSVRKQSSALFKLGDPKITPMDIAVMTRQIATMLAAGVPLVTTIELLGRGHEKAKMREL
LGNILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSGSLDLVFDRVATYREKSEALK
SKIKKAMFYPAAVVMVAILVTALLLLFVVPQFEDIFKGFGAELPAFTQLVLHISRGLQSS
WYIFLAAIVGGVFLFVRAHRNSQMVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNAVYRKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGE
ESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKV
VSG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcaacgacaacaagaaagcctcgcaccaagaaagccgagcaaaagagccaa
ccaaaaatctataccttcgaatggaaaggtgtaaatcgcgacggcaagaaaacagcaggt
gaactcaggggcgcaaccgccgctgaaatccgtagccaattgaaatcccaaggcgtaaat
ccaaagagcgtgcgtaaacagtcttctgcgctatttaaactaggggatccgaaaatcacc
cctatggatattgctgtaatgacccgccaaattgcgactatgctagcggcgggtgtacct
ttagtgacaactattgagctactcggccgcggtcacgaaaaagctaaaatgcgagaacta
ttaggaaatatccttagcgaaattcaatcgggtattcctttatccgatgctatgcgtccc
catagacgttacttcgacgaactttatgttgacctagttgcagccggtgaacattctggt
tcactagacttggttttcgatcgcgtagcgacctacagagaaaaatcagaagcactgaaa
tccaaaataaagaaggccatgttctatcctgctgccgttgtcatggtagccattttagtc
acggctttgttactcttatttgtcgtacctcaattcgaagatatatttaaaggctttggt
gctgaactgcccgcctttactcaattagtactgcatatttcccgcggcttacaatcctct
tggtatatctttttagccgccattgttgggggcgtatttttgttcgtacgggcgcaccga
aactcacaaatggtgcgagatagagtagacgaagctgtgcttaaaatcccagccattggg
cccattttacataaaggggccatggctcgattcgctcgtactttagcaaccactttcgct
gcgggcgtgccgttgattgacggtctagaatccgccgcaggcgcatcgggtaatgcagtc
tatcgaaaagcgattttaaaaattcgtcaagaagtgatggcggggatgcagatgaatgtg
gctatgcagaccactggacttttccccgacatgttagtgcaaatggtgatgataggcgaa
gaatcaggttcactagataacatgctcaataaagtctctactatctacgaaatgcaagta
gacgatgccgtagatggcttatcaagcctgatagaaccgattatgatggtggtaatcggt
actgtcgtcggcggattaattgttgctatgtacttgccaatcttccagatgggtaaagtt
gttagcggctag
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