Shewanella sp. Pdp11: AYJ58_05010
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Entry
AYJ58_05010 CDS
T11329
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_05010
Transporters [BR:
shep02000
]
Other transporters
Pores ion channels [TC:
1
]
AYJ58_05010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AUD58884
LinkDB
All DBs
Position
complement(1149289..1151682)
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AA seq
797 aa
AA seq
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MRLAIIALAVSSTLAIPAVQAEEQQPGFEKIEIIGSRIALRTATDSVAPVDIITAEQLES
TGMTETAKALQFAAPSYSFPFSSVTDGSDAVRPASLRGLSPDHTLVLVNGKRRHGSALVH
LSGTVGKGSSNVDLNAIPMTAIKRIEILRDGASAQYGSDAIAGVINVVLKDSDQGGSLSA
QAGQTYIGDGEQWRVGVNHGISLSDDGFVNVSLEAHHKDSTNRAGLDERKQYNDLPDGSA
DPREATFNRKSHQVGDAEYDNLGLFINAAQSITKDGKLYAFGGISQRETKSGAFYRRALD
ARNLTEIYPDGFLPQINPKIIDASLVLGYEFSLGEWNIDTSAGHGENSFNYNIVNTLNAS
LGPDSPTEFDAGTLTTRETNLNLDASRYFAFANDSEILFATGVSWRQNGYQIEAGETGSY
INGGYDNRAAGSQGFTGFTPESQVDETRDNTGVYVELENQLTNEFYWAAALRYENYSDFG
GNTSWKLAGRYDFTDNLALRGTINTGFRAPSVQQLYFSNISTLFNPDPMTGQLVPIESGT
FNTLSPVTKALGINELDPELSQSFSLGLVYTNDTGLALTLDAYQISIDDRIILSSSVTPN
DSPAVAAALAGTNAESARFFINAVDTRTRGVDLVVSQDFDIGSWGDLRANLAYAYNKTEI
QDIHFPEILDGLGPKLFDSIEQTRMTSATPHNTGNLGLTHELGDFKTNIRLSYFGDYTVG
YSTGDVNYSDQWVMDLSVRYAATDALSFTAGVQNLFDVYPEKRPEDNNFGGIFVYPLTNT
PFGFNGGYYFLEAKYTY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctagcgattatcgcattagcagtgtcgtctacactggccattccagctgttcaa
gccgaagagcaacagcctggcttcgagaaaatcgagatcataggctcacgcatagcgctg
cgcacagcaactgacagtgttgctcccgtagacattatcactgccgagcagctcgaatcg
accggcatgactgaaaccgctaaagcactgcaatttgctgcgccaagctacagcttccca
ttttcatcagtaacagatggttctgatgcggtgcgccccgcgagtttgcgcggcctgtcg
cccgaccacaccttagtgctagtgaacggcaaacgtcgtcatggctcagcgctagtgcat
ttaagtggcactgtgggtaaaggttcatctaacgtcgacttaaacgctatccctatgacg
gcgattaagcgtatcgaaatcctgcgtgatggtgcctcggcacaatacggctcggatgcc
attgctggcgttatcaacgtggtgcttaaggacagcgaccaaggcggtagcctctcggct
caagcagggcagacctacataggtgatggcgagcaatggcgtgtgggtgtaaaccacggc
atcagtttaagtgacgatggctttgtgaatgtttcactagaagcccatcataaagacagc
actaaccgcgccggattagatgaacgcaaacaatacaatgatttacccgatggctcagcc
gatccccgcgaagcgacattcaaccgtaagagccaccaagtcggtgatgccgaatatgac
aacttaggtctatttatcaacgctgcccagtccatcacaaaagatggcaaactctatgcg
tttggtggcatcagccaacgtgagactaagtcaggcgccttttaccgccgcgcactcgac
gcccgtaacttaactgaaatctatccagatggtttcttgccgcaaatcaatcctaaaatt
atcgatgcgtccttagtgctagggtatgaattcagcctaggcgagtggaatattgatact
tcagcaggccatggtgaaaactcatttaactacaatattgttaataccttaaacgcctct
ttaggcccagatagcccaaccgagtttgatgcaggcacactcacgacccgtgaaaccaat
cttaatctcgatgcctcgcgctactttgcctttgctaatgattctgaaatcctgtttgcg
acgggagtgtcgtggcgccaaaacggctatcaaattgaagccggtgaaacaggttcatac
atcaatggcggttatgacaaccgcgcggcgggtagccaaggtttcactggctttacccct
gagtcgcaagtggatgaaacccgtgacaatactggcgtttatgtcgagcttgaaaaccag
ttaaccaatgagttttactgggcggcggcgctacgttacgaaaactattctgactttggt
ggcaacaccagttggaagttagcgggccgttacgactttaccgacaacttagccctgcgc
ggcactatcaacactggctttagagcgccgagtgtacagcaactgtacttcagcaatatt
tcgacgctgtttaatcccgatcctatgacgggtcagctggtgcctattgaatctggcact
ttcaacaccctatcgccagtgaccaaagcattgggtattaatgagttagatcccgagcta
tcccagtcatttagcttaggcttggtgtacaccaatgacactggcttagcactgacatta
gatgcctatcaaatctccatcgatgatcgcattattctgtcgagctcagtgacgcctaat
gattcgcccgccgtagcggcagcgttagcgggcaccaatgcggaatcggcgcgcttcttt
atcaacgccgtcgatacccgcacccgtggtgttgaccttgtggtgagccaagattttgat
atcggctcttggggtgatttacgggcgaacttagcctatgcctacaataagactgaaatc
caagatattcatttcccagagattttagacggacttggccctaaactgttcgatagcata
gaacaaactcgcatgacctcggcgacgccacataacacaggtaacttgggcttaacccac
gagctaggtgactttaagaccaatattcgcctcagttactttggcgattacactgtgggt
tactcaacgggtgatgtgaattacagcgatcaatgggtgatggatctgtcggtgagatac
gcagcaaccgatgcgctgagtttcaccgctggggtacaaaacctgtttgatgtgtatcca
gaaaaacgccctgaggacaataacttcggaggcattttcgtttacccattaaccaacacc
ccgtttggttttaatggtggctactatttcttagaagctaaatacacttactaa
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