Shewanella sp. Pdp11: AYJ58_05665
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Entry
AYJ58_05665 CDS
T11329
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
shep Shewanella sp. Pdp11
Pathway
shep03030
DNA replication
shep03430
Mismatch repair
shep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYJ58_05665
03430 Mismatch repair
AYJ58_05665
03440 Homologous recombination
AYJ58_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shep03032
]
AYJ58_05665
03400 DNA repair and recombination proteins [BR:
shep03400
]
AYJ58_05665
03029 Mitochondrial biogenesis [BR:
shep03029
]
AYJ58_05665
DNA replication proteins [BR:
shep03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AYJ58_05665
DNA repair and recombination proteins [BR:
shep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AYJ58_05665
TLS (translesion DNA synthesis) factors
Other SOS response factors
AYJ58_05665
Mitochondrial biogenesis [BR:
shep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
AYJ58_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AUD59009
LinkDB
All DBs
Position
1304701..1305405
Genome browser
AA seq
234 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGSRGQGGQ
AQGAPMGGGMPQNAGYQSAPQQAAPAQNQYAPAPQAAPAYQAPAQQQYAAPAPAQQQYGQ
QQAQPQQGGYAPKPQAAPAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtgcgttatatgccaaacggtaatgcagtcgcaaacatcacagtagcgaccagcgaatcg
tggaaagaccaacaaggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttc
ggcaaattagctgaaattaccggtgaatacctgcgtaaaggttcacaggtttaccttgaa
ggtaaactgcaaactcgtaagtggaaagaccaaagcggtcaagaccgttacagcactgaa
gtggttatcgatcaaagcggtagcatgcaaatgctaggtagccgtggtcaaggtggccaa
gcacaaggcgcgccaatgggcggcggcatgccacaaaacgcaggttatcaatctgcacca
caacaagcggcaccagcgcaaaatcaatatgcgccagcccctcaagctgcacctgcttac
caagcgccagctcagcaacagtatgctgcgccagcacctgctcagcagcaatatggacag
caacaagctcaaccacaacaaggtggttatgcgcctaagccacaagccgctccagcgcca
gcttatcaagcgccagctgcgccggcacaacgtccagcaccacaaccacagcaaaacttc
acgccagatttggatgatggctgggacgacgatatcccgttttaa
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