Shewanella sp. Pdp11: AYJ58_09220
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Entry
AYJ58_09220 CDS
T11329
Name
(GenBank) short-chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
shep Shewanella sp. Pdp11
Pathway
shep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYJ58_09220
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Motif
Pfam:
SCFA_trans
DcuC
ABG_transport
Motif
Other DBs
NCBI-ProteinID:
AUD59659
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Position
2126352..2127701
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AA seq
449 aa
AA seq
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MLNKAAKPLVKLVDRFLPDPYIFVLLLTLVVLIAAVVAEHKTPLEVINYWGDGFWTLLSF
SMQMLLVLVAGFMLASSPPIKKLLDAIAGLAKSAPQAIMLVTLVSLAASWINWGFGLVVG
ALFAKALARKVKVDYRLLVASAYSGFVVWHGGLAGSIPLTIATAGHFSEAQIGIIPTSDT
IFASFNLLLVAILFVVMPLVNRFMLPEDKDSIYVDPSALDDKVSEPAVSALNPENVSERQ
PESRPADKLENSRLLGWSVGGAGLVYLGYYFWVQGGSLNLNLVNFLFLFLAILLHQTPRS
LLTSLNEAIKGGAGIVIQFPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFISAG
IVNIFVPSGGGQWAVQAPIMLPAAQALGADVARVAMAVAWGDAWTNLIQPFWALPVLAIA
GLKARDIMGFCLMQLMITGVIISIALSWF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaaagcggcaaaacctctggtcaaactcgtcgaccgattcctacccgatccc
tatatattcgtgcttttactcaccttagtggtgttaattgctgccgtggtcgcagaacac
aaaacgccactggaagtcattaattattggggcgatggcttttggaccctgctgagtttt
tcgatgcagatgttgttagtgctggtggcgggatttatgctggcaagctccccgccaatt
aaaaagctgctcgatgcgattgcgggtttagctaagtcggcaccgcaagccattatgtta
gtgaccttagtatcactggccgccagttggattaactggggttttgggctagtggtgggg
gcgttgtttgccaaagccttagcccgcaaagtaaaagtggattatcggctgctggtcgcc
agcgcctattctggctttgtggtttggcatggtgggctcgcgggttctatcccattaacc
atagcaacggcggggcatttctccgaagcacaaattggcattatccccaccagcgacacc
attttcgcgagctttaacttactgttagtggcgattttgtttgtggtcatgccattagtg
aatcgttttatgttgcctgaagacaaggacagcatttatgtcgacccaagcgctctggac
gataaagtaagcgaacccgcagtttcggcgcttaaccctgaaaatgtgagcgagcgtcag
cctgaaagccgtcctgcggataagttagaaaatagccgcttactcggctggagtgtcggt
ggcgctgggcttgtgtacttaggctattacttttgggtacagggcggcagcttaaacctt
aacttagtgaacttcttattcctttttctcgctatcctcttacatcaaacgccacgcagt
ttattaaccagcttgaatgaggccattaagggcggcgcagggattgtgatccaattccct
ttctatgcgggcattatggctgtgatggtgcaatcgggtttagcccaaagtatttcggaa
ggttttgtggccatcgctagcgccgagagcctgccattttggagctttatcagcgcggga
attgtaaatatttttgtgccatcgggaggcggtcaatgggccgtacaggcaccgattatg
ttacctgctgcgcaggccttgggcgccgatgttgctcgggtggccatggccgtagcttgg
ggtgatgcctggactaacctcattcagcctttctgggcactgcccgttctggcaattgca
ggcttaaaagcgcgggatattatgggattttgtttaatgcagctgatgatcacaggcgtg
attatcagtatcgcgttgagctggttttaa
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