Shewanella sp. Pdp11: AYJ58_09795
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Entry
AYJ58_09795 CDS
T11329
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_09795
Transporters [BR:
shep02000
]
Other transporters
Pores ion channels [TC:
1
]
AYJ58_09795
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
AUD59768
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Position
complement(2237379..2240015)
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AA seq
878 aa
AA seq
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MSEGQLFKSSLLALCIANALFGMSSTAVAAEQQEATAENMEVIQVRGIRRSIEASMNTKR
FADSTVDAITSEDIGKFPDKNIGDALQRISGVTVDRQYGEVSGVTIRGTAPEQSRILLNG
QTVASTSWYDLGPATRTFNMELLSAEQVNAVEVHKTPTARLEEGALGGTVDLKTRKPLDL
DAHTYQVAGELSQSSLYDETDPSGSFLGSWKNDDEKFGILGAYSVEKITSGRQVLESLSG
YYEYFAADPAQNQESTVGAWGIGSQAFRAERERTSAQVTLQFAPTEKTEFTLDYFNFELD
IPHVNHNFLTVGARGSGSTNVVNNAQGGTASATILPAYASIIYNPVVRHAVNMKSDVLNL
TGKYVGDSFTVSGVIGQSTSDGGTQGGSSSWWIPATDQGGKIGDPAFPNGQGSVDGGFSY
DATGPYQVVLTSLDANDASQFKHAQEANYETTVQDHKVTYAQSDFEYQLDHDFINKIAVG
IKYNTSDFERNAFNRNPAEILGFVPNGNLANWSDGVLSGLHSQSGGNVLDSYAKLDEDKW
WAFISEKYANGELVEVADLGNTFTVEEEMLALYAQADFSGEFYRGNFGVRYVNTDQTSTG
FADGKPYNESVNYDNWLPSINVAFDLQEDLILRASASSVMARNNYSDLKPGLAIAKNFGT
ATGGNPNLKPYKANQADLGIEWYFTESSMLSAALFYKDIDNVVFVTESTQYIEGCGASES
EWDKCRVTAPANGGSGSVTGLEIQLQHNFESGFGFLTNYTYVDSKSTRPDGTEQMIEGVS
ENSFNGSLFYEDDLFSARIAYNWRSEYLGVGNIQNVLNDSYQQVDASIIWHAMENLDISL
EGVNLTNEVVQSYDVKYGLTQNTIEFGSRYFVGASYKF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggtcaactatttaagagctctttgctcgcattatgtatcgctaacgcctta
ttcgggatgagctcaaccgcagtcgcggcggagcaacaagaggcaacggcagaaaatatg
gaggtgatccaagtccgcggcatacgtcgctcgattgaagcctcaatgaataccaaacgc
ttcgccgactctacggtcgatgccatcacctcggaagatataggtaagtttcccgataaa
aacatcggtgatgcgctgcagcgcatctctggggtgacggtcgataggcaatacggtgaa
gtaagcggcgttactattcgcggtacagcgccagagcagagtcgtattttgctgaacggt
caaactgttgccagcacttcttggtatgacttgggtcctgccactcgtaccttcaatatg
gaattattgtcggccgagcaagtgaacgccgttgaagtgcacaaaaccccgaccgccaga
cttgaagaaggtgcgctgggcggcactgtcgatctcaaaacccgcaaacccttagatctt
gatgcccacacctatcaagtcgctggcgagctgagccaaagcagcctgtacgatgaaaca
gacccgagtggctctttcctcgggagctggaaaaatgacgacgaaaagttcggcatttta
ggcgcctattcagtagaaaaaattaccagcggccgccaagtactggaatctctcagtggt
tattatgaatacttcgccgccgatcccgcgcaaaatcaagaatcaactgtaggcgcttgg
ggtattggctcgcaggcctttagagccgaacgtgaacggaccagtgcccaagtcacattg
caatttgcaccgacagaaaaaacagaatttaccttagattactttaattttgaactcgat
atcccccacgtaaaccataacttccttacggttggcgcgcgcggttcgggctccaccaac
gtagtgaacaacgcccaaggcggcacagcatcggcaacgattctgccggcgtatgcgtcg
attatttataaccctgtggtacgccacgcggtcaatatgaaatctgacgtactcaacttg
accggaaaatacgtcggggacagttttacggtgagtggcgttattggccaatcgacctca
gatggtggcacccaaggcggctcatcttcttggtggatccccgcgacggaccaaggcggc
aaaattggcgatcccgccttccctaacggtcaaggcagtgtcgatggcggctttagttac
gatgccaccggtccctaccaagtggtgctgacgagtttagatgccaacgatgccagccag
ttcaagcatgcgcaggaagccaactacgaaaccacagtgcaagatcataaagtgacctac
gcgcagtctgacttcgaatatcaactcgaccatgattttattaacaaaattgcagtcggg
attaagtacaacaccagtgatttcgagcgtaatgccttcaaccgtaaccccgcagaaatc
ctaggtttcgtgcccaatggcaacctcgctaactggagcgatggtgtactttctgggcta
cattcccagagcggtggcaatgtgctcgactcctatgccaagttagatgaagacaaatgg
tgggcctttatcagtgagaaatacgccaatggcgagttagtggaagtcgccgatctcggt
aacaccttcactgtcgaagaggaaatgttggccctgtacgcccaagcggatttcagcggc
gaattctaccgtggtaactttggcgtgcgttacgttaacacagaccaaacctcaaccggt
tttgccgatggcaagccctacaatgaatccgttaattacgataattggctaccgagcatc
aacgtcgccttcgatctacaagaagatttaatcctacgtgcttcggcctcttccgtgatg
gcgcgtaacaactacagcgatctaaaacctggcttagccatagcgaaaaactttggtact
gcgaccggcggtaatccaaatttgaaaccctataaggcgaatcaagccgaccttggcatc
gaatggtacttcactgaatcttctatgttgtcggcggctttgttctacaaagatattgat
aacgtagtgtttgtcactgagtcgacgcaatatatcgaaggttgcggcgcgtcagaatcc
gagtgggataaatgccgcgtcacagccccagccaacggcggtagcggctcagtgactggg
cttgaaatccagctgcagcataactttgaaagcggttttggcttcttgaccaactacacc
tatgttgacagtaagagcacgcgccccgatggcacagagcagatgattgaaggtgtgtca
gaaaactccttcaacggctcactcttctacgaagatgatctattcagcgcccgtatcgcc
tataactggcgttcagaatacttaggcgtgggtaacattcaaaacgtgttaaacgacagc
tatcaacaagtcgatgcctcgattatttggcatgcgatggagaacttagacatttcactc
gaaggggtaaacctaaccaatgaagtggtgcaatcctatgatgttaaatacggattgacc
caaaataccatcgaatttggttcacgttatttcgtcggtgccagctacaaattttaa
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