Shewanella sp. Pdp11: AYJ58_10700
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Entry
AYJ58_10700 CDS
T11329
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AYJ58_10700 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shep01007
]
AYJ58_10700 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shep03016
]
AYJ58_10700 (cysS)
Enzymes [BR:
shep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
AYJ58_10700 (cysS)
Amino acid related enzymes [BR:
shep01007
]
Aminoacyl-tRNA synthetase
Class I (G)
AYJ58_10700 (cysS)
Transfer RNA biogenesis [BR:
shep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AYJ58_10700 (cysS)
Prokaryotic type
AYJ58_10700 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
DUF6155
DUF761
Motif
Other DBs
NCBI-ProteinID:
AUD59937
LinkDB
All DBs
Position
2464336..2465715
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AA seq
459 aa
AA seq
DB search
MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE
VNFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAE
IIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMD
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRS
QLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIAKFKAAMDDDFNTPEAYSVLF
DMVRDINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGGGSDDEVAEIEALIVE
RNRARTEKDWAAADVARNRLNELGVELEDGPSGTTWRKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagatttacaacagtattacccgccaaaaacaggaatttaagccgattactccc
ggaaaaatcgggatgtacgtgtgtggtgtgaccatatacgatctctgtcatattggtcat
ggccgtacttttgtttcctttgacatgatagtgcgctacctgcgttacgctggttatgaa
gtgaattttcagcgcaatattaccgacgttgatgacaaaattatcaagcgtgctaacgag
aataacgaaagctgcgaggccttaactgagcgtctgatcggtgaaatgcatcaagacttc
gatgccttaaatatgctgcgccccgattttgaaccacgtgcaaccctgcacattgccgaa
attatcgacatggttgagttattactcgcccgtggtcatgcctatgtggcgagcgatggt
gatgtgcttttcagcgtggcttcctatcctgattacggccgtttatcgggccagaattta
gatcaactgcaagccggagctcgggttgaagtggacgaaaccaaacaaaatccaatggat
tttgtgttgtggaaaatgtcgaaacctggcgaaccgacgtgggaatcaccatggggaccg
ggtcgtcctggctggcatatcgaatgttctgccatgaacagcaaacatttaggtctgcat
tttgatattcatggcggcggctctgacttgcagttcccgcaccatgagaacgaaatcgcc
cagtcttgctgtgcccatgacacgccatacgtaaactattggatgcacacgggcatggtg
atggttgaccgtgaaaaaatgtctaagtcgttaggcaatttcttcactattcgcgatgtg
cttggtcactatgatgctgaaactgtgcgttatttcctgttatcgggccactatcgtagt
caactgaactattcagaagataacttgaaacaagctcgctcagccttagagcgtttgtat
accgctattaaagatgtcgacttgactgtcgcagcggcgccagcagaagagtttatcgct
aaatttaaagcggcgatggatgatgactttaatacacctgaagcctattcagtcctgttt
gacatggtgcgtgacattaatcgcttaaaactgaccgatatggcacaggcatcggcatta
gcggtcaccttaaagcagttagcggatgtgctaggcttattaagccaagagcctgaagct
ttcttccaaggcggcggtagtgatgatgaagtggctgaaattgaagctttaattgttgaa
cgtaaccgtgctcgtactgaaaaggactgggctgcggcggatgtggcgcgtaaccgtttg
aatgagttaggcgttgaactcgaagatggcccaagtggtaccacttggcgtaagaaataa
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