Shewanella sp. Pdp11: AYJ58_10785
Help
Entry
AYJ58_10785 CDS
T11329
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
shep Shewanella sp. Pdp11
Pathway
shep01503
Cationic antimicrobial peptide (CAMP) resistance
shep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AYJ58_10785
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
AYJ58_10785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_10785
Transporters [BR:
shep02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
AYJ58_10785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AUD59951
LinkDB
All DBs
Position
complement(2481658..2483283)
Genome browser
AA seq
541 aa
AA seq
DB search
MSVLIRRLCLTTAVSCMSWLLVACGPQRLPSGLVYCSEGNPESFNPQLVTSGTTIDATSH
QIYSRLVDYDTQSGKLVPALATSWAMSDDGLSYRFTLRENVQFQHSKRFTPTRPFNADDV
LFSFKRIIDTQHPYHFVSRTGYPFFQSIGFSEQVKGIEKINDHEVVFYLTRKDASFLSNL
ATDFAVILSDEYAQQQLALGHPENVDHFAIGTGPFTLVQYAKNEYIRYRRHPDFWGEPAK
IDMLVFDITPKSTVRLAKLIAGDCSVSALPKAGELPVIKQHEKLNIESQPGLNVAFWAFN
TQKPPLDDVRVRRALAYAVDKQNILRAVYQNTAIEATGVLPPASWAYANNKGLVDYNPQK
ARDLLKEAGIKNLSIDIWAMPVARAYNPNALKTAELIQSDLANVGVKVNIVSYDWSVFSQ
RLSRDDYDSVLIGWNADNSDPDNFFTPLLSCAAMQSNNNRSRWCNPEFDAILDSAREVSD
QGERKVIYQQAEAFLAEQVPMLSLAHAKRVALTRSDIKDMQLTPFGGISFAHTSQAQEEA
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctaattagacgcctgtgcctaacaactgcagtttcttgcatgagttggttg
ttggtcgcgtgtggcccccaacgactcccttccggtttggtgtattgctccgaagggaat
cctgagtcttttaatccacaattggtgacatctggcacgacaatcgatgccacctcgcac
caaatttatagtcgcttagtggattatgatacccagtctggcaagcttgtccctgccttg
gcgacgagttgggccatgtccgatgatggcttaagctatcgcttcaccctcagggaaaac
gtgcagttccagcattcgaagcggtttacgccaacacgcccctttaatgccgacgatgtg
ttgttctcctttaagcgtattatcgatacccagcatccttatcattttgtctcccgcacg
ggttatcccttcttccaaagtattggcttttctgagcaggtcaaagggatagaaaagata
aacgatcatgaagtggtcttttatttgacccgcaaagacgcgtcttttctgtcgaattta
gccaccgactttgcggtgatcttatccgatgagtatgcgcagcagcagttagcattgggt
catcctgaaaacgtcgaccactttgccataggtacagggccgttcactttagtgcagtac
gcgaaaaacgaatatattcgctatcgccgtcatcctgacttttggggcgaacccgcaaaa
atcgatatgctggtatttgatatcacgcccaaaagtaccgtcagactcgcgaaactgatc
gcaggagattgcagtgtgtctgcgctgcccaaagcgggtgagctaccggtcatcaagcaa
catgaaaaattaaatattgaatcacaacctggactcaacgtcgcattttgggcctttaac
acccagaaaccaccactagatgatgttcgtgttcgccgcgccctcgcctatgcggtcgat
aaacaaaatatcctgcgggcggtttatcaaaatactgccattgaagccacgggggttctg
ccgccagcatcttgggcctatgccaataacaaagggcttgtggattacaatccgcaaaaa
gcgcgcgacctgttaaaagaagcaggcattaaaaatctcagtattgatatttgggccatg
ccagtcgcccgcgcctataatcccaatgcgttaaaaacggccgaattaatacaatcagat
ctggccaacgtaggcgtaaaagtgaacatcgtcagttacgactggagcgtgtttagtcag
cggctcagccgcgatgactatgattctgtgctgattggctggaatgccgataacagcgat
cccgataacttctttactccactgctaagctgcgctgcgatgcagtcgaacaacaatcgt
tcgcgctggtgtaaccctgagtttgatgccatcttagatagtgcaagggaagtgtcagat
cagggcgaacgtaaagtgatttatcagcaagcagaagcctttttggccgaacaagtacct
atgttgagcctagcccatgccaaacgtgtggcgttaactcgtagtgatatcaaggatatg
caactcacgccttttggcggtatttccttcgcccacactagccaagcacaagaggaggcc
aattaa
DBGET
integrated database retrieval system
