Shewanella sp. Pdp11: AYJ58_11485
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Entry
AYJ58_11485 CDS
T11329
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00330
Arginine and proline metabolism
shep01100
Metabolic pathways
shep01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AYJ58_11485
Enzymes [BR:
shep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
AYJ58_11485
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AUD60078
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Position
2636106..2638019
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AA seq
637 aa
AA seq
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MNDWSIDDARAGYNVTHWSQGFYGISDHGEVTVSPDPKNPDYKIGLNELAKDMVKAGVAL
PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE
VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS
ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQHD
MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRELGASVNCFDVGGGLAVDYDGTR
SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA
YQPEDIQAPAEESPQLLHNMWHSWSEISGRADQRALIEIYHDSQSDLQEAHSLFALGQLS
LAERAWAEQANLRVCHEVQGLLSAKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSADSPYLIG
FFLVGAYQEILGDMHNLFGDTNSAVVRIEDNGVTNIESVLAGDTVADVLRYVNLDAVAFM
RTYEELVNLHIAEDERAQILEELQVGLKGYTYLEDFS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattggtctattgatgatgctcgtgctgggtacaatgttactcactggagccaa
ggtttttatgggatcagcgatcacggtgaggtgacagtgtcaccggacccaaaaaatcct
gattacaagattggcttaaatgagctagccaaagacatggttaaagcgggcgtcgctttg
cctgtactagttcgttttccgcagatcctgcaccacagagtgaacagtttgtgccaagca
ttcgaccaagcgatacagaagtacgagtatcaggcggactatttgctggtttacccgatt
aaagtaaaccaacagcaaactgtggtggaagagatcctggcgagtcaggcatcaaaagaa
gtaccacaactgggtttagaagcgggcagtaagcctgagctgatggctgtgttagccatg
gcgcaaaaagccagttcagtcattgtatgtaatggttataaagataatgaatatatccgt
ttagcactgattggtgaaaagttaggccacaaggtttacatcgttttagaaaaactgtct
gaactgaaaatggtgttagctgaatctaaacgtttgggcgttaaaccgcgtttaggtttg
cgtgcgcgtttagcattccaaggcaaaggtaaatggcaggcgagcggtggcgagaagtct
aagttcggtctatcagcagcacaaattttgctggtggttgaacaacttaagcaacacgac
atgctggattcgctgcagttactgcatttccacttaggttcgcaaatcgccaacattcgt
gatattcgccaaggtgtgagtgaagcaggtcgcttctactgtgaattacgtgaattaggc
gcaagtgttaactgcttcgacgtcggcggtggtttagcggtggattacgatggcacacgt
agccaaagtaataactcgatgaactatggcctgaccgaatacgctaacaatatcgttaac
gtattgaccgacatctgtaatgaatacgagcagcctatgccacgtattatttcagaatcg
ggtcgttacttaaccgcgcaccatgctgtgcttatcaccgatgttattggtactgaagcc
tatcagcctgaagatattcaagccccagctgaagagtcaccacagttattgcataacatg
tggcattcatggtcagagatcagcggccgcgctgatcaacgcgccttgattgagatttac
cacgatagccaaagtgacttacaagaagcgcattcgctattcgctttaggtcaattgagc
ttagcggagcgtgcgtgggctgaacaagctaacctgcgtgtgtgccatgaagtgcaaggg
ctattgagtgcgaagaaccgttatcacagaccgattattgatgagctcaatgaaaagtta
gccgataaattctttgttaacttctcattattccagtcactaccggatgcttggggtatt
gaccaagtgttcccagtattgccgttatcgggtttagacaaagcccctgagcgccgtgct
gtgatgctcgatatcacctgtgactctgacggtattgttgatcaatacgttgatggacaa
gggattgaaaccacattgccagtgccagcttggagtgcggatagcccgtacttgattggt
ttcttccttgtgggtgcctaccaagaaatcttgggtgatatgcataacctgtttggtgat
actaactctgcggttgttcgcatcgaagataacggtgtgacgaacattgaatcggtattg
gcgggtgatactgtcgctgacgtattgcgttacgttaacttagatgcggtggcctttatg
cgcacttacgaagagttagtgaatctgcatattgccgaagatgaacgcgcacaaatttta
gaagaactgcaagttggtctaaaaggctacacttacttggaagatttttcttaa
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