Shewanella sp. Pdp11: AYJ58_12205
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Entry
AYJ58_12205 CDS
T11329
Name
(GenBank) fumarate hydratase
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00020
Citrate cycle (TCA cycle)
shep00620
Pyruvate metabolism
shep00720
Other carbon fixation pathways
shep01100
Metabolic pathways
shep01110
Biosynthesis of secondary metabolites
shep01120
Microbial metabolism in diverse environments
shep01200
Carbon metabolism
Module
shep_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shep_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shep_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AYJ58_12205
00620 Pyruvate metabolism
AYJ58_12205
09102 Energy metabolism
00720 Other carbon fixation pathways
AYJ58_12205
Enzymes [BR:
shep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
AYJ58_12205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
DUF5864
Motif
Other DBs
NCBI-ProteinID:
AUD61979
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Position
2799236..2800780
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AA seq
514 aa
AA seq
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MSSNHEMSVNSVIKQADFIESVADALQYISYYHPKDFVDAMSQAYEREQSAAAKDAIAQI
LINSRMSAEGKRPLCQDTGIVTTFVKVGMGVQWDKTDMTIQEMVDEGVRRAYTNPDNPLR
ASIVSDPAGSRKNTKDNTPSVVHIDMVPGNHIEVAIAAKGGGSENKAKMVMLNPSDDIAA
WVEKTLPTMGAGWCPPGMLGIGIGGTAEKAAVLAKEALMESVDIHELMARGAQTTEEKLR
LDIFERANNLGIGAQGLGGLTTVLDVKIKSAPTHAASKPVVMIPNCAATRHVHFHLDGSG
PAELTPPSLSDWPEITREVGDDVRRVNLDTVTQADIEQWQSGETILLSGKMLTGRDAAHK
RIQSLIESGEGLPEGVDFTGKFIYYVGPVDPVGTEVVGPAGPTTATRMDKFTDLMLEKTG
LMGMIGKAERGPATVESIKKHKAVYLMAVGGAAYLVSKAIKHSRVVAFADLGMEAIYEFD
VQDMPVTVAVDSNGVNAHETGPAIWKVNIANAKA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaccatgaaatgtctgtcaattctgtgattaagcaagccgactttattgaa
agtgtggcggatgctttgcaatacatctcttattaccacccgaaggattttgttgatgcc
atgagccaagcttatgagcgtgaacaaagtgcggcggcgaaggatgccattgcccagata
ttaattaactcgcgtatgtccgccgaaggcaagcgtcctctgtgtcaagacactgggatt
gtgaccaccttcgttaaagtgggtatgggtgtccaatgggacaaaaccgatatgacaatt
caggaaatggtcgacgaaggtgttcgtcgtgcctataccaatcctgataacccactgcgt
gcatcaatagtgtcagatcctgcgggcagccgtaaaaataccaaagataacacgccatct
gtggtgcatatcgacatggtgccaggcaaccacatcgaagtagcgattgcggccaaaggc
ggcggcagtgaaaataaagctaagatggtgatgttaaacccatctgatgatatcgccgct
tgggtagaaaaaacgttaccgacgatgggtgcaggctggtgtccaccgggtatgctgggt
atcggcattggcggcacggcggaaaaagccgccgtattagctaaagaagcgctgatggaa
agcgtggatatccatgagttgatggcccgtggcgcgcaaacgaccgaagaaaagctgcgt
ttagacatttttgagcgcgcgaacaacttaggcataggtgcccaaggtcttggcggttta
accacagtgttagacgttaaaatcaaatcggcgccaacccatgcggcttcaaagcctgtg
gtgatgatccccaactgtgctgctactcgccacgtacatttccatttagacggctcaggt
cctgctgaattaacgccgccatcattgtcagattggccagaaatcacccgtgaagtgggt
gatgatgtgcgccgtgttaacttagatactgtgactcaagccgatatcgagcagtggcag
agcggtgaaaccattctgctgagcggtaaaatgctcacaggtcgtgatgcggcccataag
cgcattcaaagcctaatcgaaagtggtgaaggtctgccagaaggcgtggactttacgggt
aaatttatttactacgttggccccgttgatccagtcggtactgaagttgtcggtcctgcg
ggcccaactacggcaacccgtatggataaattcactgacttaatgttagaaaaaacaggc
ttgatgggcatgataggtaaagctgagcgcggccctgcgacagttgaatcgatcaaaaaa
cacaaagcggtatatcttatggccgttggcggcgctgcgtatttagtgtcaaaagcgatt
aaacattctcgcgtcgtggcctttgccgatttaggcatggaagcgatttacgagtttgac
gtgcaagatatgccagtgactgtggctgtggattcaaatggcgtgaacgcccatgaaact
ggcccagcaatttggaaagtgaatatcgccaacgcgaaagcctaa
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