Shewanella sp. Pdp11: AYJ58_12425 Help Entry AYJ58_12425       CDS       T11329                                  Name (GenBank) ligand-gated channel protein   KO K02014   iron complex outermembrane recepter protein Organism shep  Shewanella sp. Pdp11 Brite KEGG Orthology (KO) [BR:shep00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:shep02000]     AYJ58_12425 Transporters [BR:shep02000]  Other transporters   Pores ion channels [TC:1]    AYJ58_12425 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TonB_dep_Rec_b-barrel Plug Motif Other DBs NCBI-ProteinID:  AUD60248 LinkDB All DBs Position complement(2852228..2854954) Genome browser AA seq 908 aa AA seqDB search MMRFKPSLLTLALIAAGASMHSYAADEVATDKTAKDENIEVIQVTGIRRSLQESQSLKMS SSSIVEAISAEDIGKLPDVSIAESLARLPGVSAQRLDGRANVISIRGMGPDFTTATLNGR EQASVNDNRSVEFDQYPSELLNRVVVYKTPDASVMAQAIGGTVDMQTISPLAHGEQTIAV SLRGEMNDLGSLNSGSSDTGYRGSISYIDQFADDTIGVAIGYARMMSPNQEERWQAWGYP TNDNGDSVLGGAKPFVRSSELERDGVLAVFEYAPNTTYHSTLDIYYSKFTDDQRLRGIEI PGAWGTNGGVIPTTTDNGLVTEGVIKGAEVVIRNDVNKRDADSLSIGWNNKFNINDNWNV EADISMSRANRTDIGMESYSGTGRGTGVGAVDDLGFAYNGKGGYIFDHNLDYSDKNLIKL GDPLGWGSPLGANTQDGFINKPEIEDELKSFRLSAEYVLDGGAVRSVEFGVNRTNRDKTK LDKGYYLTLKGYDGSANYTMAVPDQYLLAPTSLDFFGMGNVLSYDSLAFYNDGNYTETDV ADVDLSRATNSWAVQEKVTTGYVMANLESEVFGIPFTGNAGLQAVHTDQSSDGTVATVEN EVVVLTPRTAGDSYVEWLPSVNLSFEVADSQVVRLAAARTLTRSRMDKMNANLNYTYSAN PSGGNVNWSGSAGNPELRPWLARQYDLSYENYFSDQGYFSVAIFYKDLENYVYDQHTDFD FSTLFPQGPTDNPIGDVTQPQNGEGGYVQGVEASVSVDFGMFADVLSGFGTVISGSYNDS EVKETPTSNPTTLPGLSEKTLNATIYYENSGFEARISSRYRSDFLGEVTKISLQRENVNI KAETVVDAQIGYDFSESGIESLYGLSVQFQVNNLTNEPFTSYTSDDQRLVRDYQNYGRNF MLGANYKF NT seq 2727 nt NT seq  +upstreamnt  +downstreamnt atgatgcgatttaaacccagtttgctaaccttagcgctcattgccgcaggtgcgagtatg cactcctatgcggcagatgaagtggcgacagataagacagctaaagatgaaaatattgaa gtgattcaagtcactggtattcgccgtagcttgcaagaatcccaatcacttaagatgtca tcctcttctatcgttgaagccatttcagcggaagacataggtaaattaccggatgtcagt attgcagaatctctagcacgattgcctggcgtatcggctcaacgactcgatggtcgtgcc aacgtgatttctatccgcggtatgggccctgactttactaccgccacattaaatggtcgc gaacaggcctctgtgaacgataaccgcagtgtggaattcgaccaatatccatctgagtta ttaaatcgcgttgtagtttacaagacacccgatgcctcagttatggcgcaagccatcggc ggtacggttgatatgcaaacaatcagtcctttagcccacggtgaacaaacgattgccgtt tcgctacgcggcgaaatgaacgatttaggttcattaaacagcggctcaagtgacacaggc taccgtggcagtatctcttatattgaccaattcgccgatgacactattggtgtcgccatt ggttatgctcgcatgatgtcacctaaccaagaagaacgttggcaagcttggggttaccca accaatgacaatggtgatagcgttttaggtggtgcaaaacctttcgttcgttcaagtgaa ttagaacgtgatggtgtactcgccgtatttgaatatgcgccaaataccacttaccactcg accttagacatttactactcaaaatttaccgatgatcaacgcctacgaggcattgaaatc cctggtgcttggggcacaaacggtggcgtaattccgacgacaactgataatggtttagtc actgaaggtgtcatcaaaggcgctgaagtcgttatccgtaacgacgtcaacaaacgtgat gcggattctctgtctattggctggaataacaaattcaacatcaatgataactggaatgtt gaagccgatatctccatgtctagagctaaccgtactgacataggtatggaaagttactca ggaactggccgcggtacaggtgtgggtgcggttgacgatttaggctttgcttataacggt aaaggcggttatatatttgaccataacctcgattattctgataaaaacctgatcaaactt ggcgacccactcggttggggtagcccactaggcgctaacactcaagacggctttatcaac aaacctgaaattgaggatgagctaaaatccttccgtttaagcgctgaatatgtgctcgat ggcggtgccgtccgtagcgttgagtttggtgtgaatcgtactaatcgcgataaaaccaaa ttagataaaggttattacctgacactcaaaggttatgacggttctgccaattacactatg gcagtaccagatcaatacctacttgcaccgacgtcactcgatttctttggtatgggcaat gtattaagttacgactcgttggctttctacaatgacggtaactatacagaaactgatgtt gctgatgtggatctttcccgcgcaactaactcttgggctgttcaagaaaaagtgaccacc ggctatgtgatggccaaccttgaatccgaagtatttggtattcctttcacgggtaacgca ggcttacaagcggttcataccgatcaatcttctgacggtacagtggcaacggttgaaaat gaagtagtggtgttaacgccgcgcactgcgggtgattcctatgttgaatggctgccaagt gttaacttaagtttcgaagttgccgatagccaagtggtccgtttagccgcagcgcgcacg ttaacccgttcacgcatggacaaaatgaatgccaacctaaactacacttattcagctaac ccaagtggtggcaacgttaactggagtggtagcgccggtaatcctgagttacgcccatgg ttagcccgtcaatatgacttaagctatgaaaactatttcagcgaccaaggttatttctcg gtagcgatattctacaaagatcttgagaactacgtttacgatcaacatacagactttgat ttcagcactctattcccacaagggccgactgataacccgattggcgatgtcacccaacca caaaacggtgaaggtggttatgttcaaggtgttgaagcctctgtatctgtcgactttggt atgtttgccgatgtgttaagtgggtttggtactgttatcagcggctcatacaacgacagt gaagtgaaagaaactccaaccagcaatccaacaaccttgccaggtctgtcagaaaaaacc ttaaacgcgacgatttactatgaaaactcaggcttcgaagcgcgcattagctcacgctac cgcagtgacttccttggtgaagtaaccaagatcagtctgcaacgcgaaaacgtgaacatc aaagctgaaactgtggtcgatgcacaaattggttatgactttagcgaaagcggtatcgag tctctgtatggtttatctgttcagttccaagtgaacaacttaaccaacgagcctttcacc tcttacactagcgatgatcaacgtttagtccgtgattaccaaaactatggccgtaacttt atgttaggcgcaaactataagttctaa

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