Shewanella sp. Pdp11: AYJ58_12450
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Entry
AYJ58_12450 CDS
T11329
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00470
D-Amino acid metabolism
shep00550
Peptidoglycan biosynthesis
shep01100
Metabolic pathways
shep01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYJ58_12450
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYJ58_12450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AYJ58_12450
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shep01011
]
AYJ58_12450
Enzymes [BR:
shep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AYJ58_12450
Peptidoglycan biosynthesis and degradation proteins [BR:
shep01011
]
Precursor biosynthesis
Amino acid ligase
AYJ58_12450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
AUD60253
LinkDB
All DBs
Position
complement(2862723..2863736)
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AA seq
337 aa
AA seq
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MSKINLLLLCGGGSAEHDISLMSANYFETSLAKSEQFSVLRVELDKFGQYRTAAGDDCEL
TNSREIRFRDESKTPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNQFDDAAIEQTQAALAQWGSIFVKAASQGSSVGCYKVDDS
NKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYNGEVVATVPGEIICDSNTFYTFDEK
YAKNSKARTDVVAQDISFEISEQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINT
FPGSTPISMFPKMLQNHGHDFTQYLSLVINGQLTAKS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagatcaatctgcttttgctgtgcggcggcggaagtgccgaacacgatatttca
ttaatgtcggccaactattttgaaacctcactggcaaaatctgagcagttttctgtgttg
cgcgtcgagctggataaattcggccagtaccgcaccgccgcaggtgacgactgcgaactg
accaatagccgcgaaattcgcttccgtgatgaaagcaaaacgccatggccggtcgattat
gttattccttgcattcatggctatcccggcgagaccggcgacattcaatcctactttaat
ttgatccaactgccctattttggctgtgaatccgaagcgagcagcaactgcttcaataag
atcaccgctaaaatgtggttctctgccttaggtattccgaatacgccgtatattttcctg
aatcagttcgatgatgcggcaattgagcaaacccaagcagcattggcacaatggggatcg
atcttcgtcaaagcagcctcacagggttcttctgtcggttgttacaaagtggacgacagc
aataaagttgcaggcgtgctcaaggatgcgtttggctatgcgccctatgtgatcgttgaa
aaaaccataaaagcccgcgagttagaagtcgcagtctacgagtacaatggtgaagtggtg
gcgacagtgccaggtgaaatcatctgtgatagcaacaccttttacaccttcgatgagaaa
tacgccaaaaacagtaaagcgcgcaccgatgttgtcgcgcaggatatttcatttgagatc
agtgaacagatccgcgcctatgcaatcaaggcatttaaaggaatgaagctgcgtcactta
tcgcgcatcgactttttcttaaccgcggacaatgaaattctattgaatgaaatcaatact
ttcccaggttctacgccgatttctatgttccctaaaatgctgcaaaatcacggtcacgat
tttacgcaatacttgagcctagtgattaacggtcagctaaccgctaaatcttaa
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