Shewanella sp. Pdp11: AYJ58_13235
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Entry
AYJ58_13235 CDS
T11329
Name
(GenBank) tRNA 2-thiouridine(34) synthase TusD
KO
K07235
tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
Organism
shep Shewanella sp. Pdp11
Pathway
shep04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AYJ58_13235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shep03016
]
AYJ58_13235
Transfer RNA biogenesis [BR:
shep03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
AYJ58_13235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DsrE
DUF6101
Motif
Other DBs
NCBI-ProteinID:
AUD60386
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All DBs
Position
3031214..3031603
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AA seq
129 aa
AA seq
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MSKFIIQVNGPAYGTSASVNALRFSQAALLAGHQIICVFFYQDGVYNSTDLSLPASDEND
VISDWKQLAQSYQIPLVNCVSAALRRGIVSKQDASENGLSHWNVGESFIMGGLGELVTGI
ESADRLISF
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatttattatccaagtgaacgggcccgcttatggcacgtcggcgagtgttaac
gccttacgcttttcccaagctgcacttttggctgggcatcagattatctgtgtgtttttt
tatcaagacggcgtgtataactccacagatttaagcttacccgcctccgatgaaaatgat
gtgatcagtgactggaaacagctcgcgcaatcctatcagatcccgttagttaattgcgtt
tcagcagcgctgcgccgtgggattgtgagcaagcaagatgccagcgagaatggactgagc
cactggaatgtgggcgagtcatttatcatgggcggtttaggcgagcttgtcaccggcatt
gaatcggccgatcgtttgatcagtttttaa
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