Shewanella sp. Pdp11: AYJ58_13265
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Entry
AYJ58_13265 CDS
T11329
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
AYJ58_13265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
AAA_5
Mg_chelatase
AAA_14
Sigma54_activat
AAA_22
AAA_19
AAA_30
nSTAND3
ResIII
Sigma54_activ_2
ATPase_2
DUF815
AAA_2
AAA_24
Parvo_NS1
AAA_3
SRP54
ABC_tran
AAA_28
AAA_11
TniB
AAA_25
NPHP3_N
AAA_18
IstB_IS21
AAA_33
RNA_helicase
DUF5906
RCF1-5-like_lid
MeaB
AAA_17
NB-ARC
AAA_7
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AUD60392
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Position
complement(3034546..3035877)
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AA seq
443 aa
AA seq
DB search
MSSLSFNFAPDFRPLAARMRPRTIAEYIGQAHLLGEGQPLRKALEAGRAHSMMLWGPPGT
GKTTLAELIAHYSNAHVERISAVTSGVKDIRAAIEQAKAMAESRGQRTLLFVDEVHRFNK
SQQDAFLPFIEDGTVIFIGATTENPSFEINNALLSRARVYLIKRLSHDEIAHIVTQALSD
TERGLGQRQFVMPTDVLTTLAQLCDGDARKALNLIELMSDMLADGGTFTTEMLIQVAGHQ
VAGFDKNGDQFYDLISAVHKSIRGSAPDAALYWFCRILEGGGDPLYVARRLLAIASEDVG
NADPAAMTIALNAWDCFHRVGPAEGERAIAQAIVYLASAPKSNAVYTAFKAARELARDTG
QVEVPHHLRNAPTQLMKDIGMGAGYRYAHDEANAYASGENYFPESLQTAQFYFPTERGFE
KRIKDKLAQLAQLDQASEHKRYE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtttatcctttaatttcgcccccgactttcgtcccttggccgcacgcatgcgg
ccaagaacgatcgctgagtacataggtcaagcccatttactgggtgaaggccagccgcta
cgcaaagcattggaagcgggacgcgcccattccatgatgttgtgggggccgccgggcaca
ggtaaaacgaccttagccgaattaatcgcacattattcaaatgcgcacgttgaacgcatc
tctgctgtcacctctggcgtcaaagacattcgcgcggcgattgagcaagcgaaagccatg
gctgaatcccgtggtcaacgcacgttattgtttgtcgatgaagtccaccgattcaataaa
agccagcaggatgcctttctgccatttattgaagatggcactgtgatttttatcggggcg
accactgaaaacccgtcgtttgaaattaacaatgcgctgctctcgcgggcacgggtttat
cttatcaagcgcttaagtcatgatgagatagcccacatagtgactcaagccttaagcgat
accgagcgcggcttaggccaacggcaatttgtgatgccaaccgatgtgctcaccacactg
gcgcaactttgtgatggtgatgcccgaaaagcgttgaatcttatcgagttgatgagcgat
atgctcgccgatggtggtacttttaccactgagatgttgatccaagtggcgggacaccaa
gttgccggattcgataagaacggcgatcagttttacgatttaatctcagccgtccacaaa
tcgatccgcggctcagcccccgatgcggcgctgtattggttttgtcgaatattagaaggc
ggcggcgatccgctgtatgtcgcaaggcgcttactggcgattgcctctgaagatgtcggc
aatgccgatcctgcggcgatgaccatagcgcttaatgcttgggattgttttcaccgtgtt
ggcccagccgaaggcgagcgagcaatagcgcaagccattgtttatcttgcaagcgcgcca
aagagcaacgctgtctataccgcatttaaggccgcgcgtgagttagctcgcgatacaggg
caagtcgaagtgccgcaccatttacgcaatgcaccgactcaattaatgaaagacattggc
atgggagcagggtatcgatatgcccacgatgaagccaatgcctatgcaagtggtgaaaat
tatttccccgaatccctgcaaacagcgcagttttattttccgactgagcgagggttcgag
aagcgaatcaaagataagttggcgcaattagcccagttagatcaagccagcgagcataaa
agatatgaataa
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