Shewanella sp. Pdp11: AYJ58_13310
Help
Entry
AYJ58_13310 CDS
T11329
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AYJ58_13310 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shep01007
]
AYJ58_13310 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shep03016
]
AYJ58_13310 (thrS)
Enzymes [BR:
shep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
AYJ58_13310 (thrS)
Amino acid related enzymes [BR:
shep01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AYJ58_13310 (thrS)
Transfer RNA biogenesis [BR:
shep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AYJ58_13310 (thrS)
Prokaryotic type
AYJ58_13310 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
WHD_MCM_arc
Motif
Other DBs
NCBI-ProteinID:
AUD60401
LinkDB
All DBs
Position
complement(3044077..3046005)
Genome browser
AA seq
642 aa
AA seq
DB search
MPVITLPDGSKREFAHAVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDAELSII
TAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLEHKLTQDDIDAL
EKRMLQLAKTNYDVVKRVVSWQEARDTFAARGEDYKIAILDENISKDATPALYHHEEYTD
MCRGPHVPNMRFCQHFKLMSIAGAYWRGNSENKMLQRIYGTAWADKKALSTHLTRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELERFIRRKLNQYTYQEVKGPLMMD
RVLWERSGHWDKYSEAMFTTSSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHIFCTDSQVQEEVSACIQMVYDTYATFGFENIVVKL
STRPEKRIGDDAMWDRAEEALKQALRDNNIEFTILPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPSRLGATYVAEDNSRQTPVMIHRAILGSLERFLGILIEEYAGRFPTWLAPM
QVVVMNITDKQADYVEEVVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQE
MENKEVAVRTRDGIDLGKMRLEDFATKIHQQISLRSLKLLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaattacacttcccgatggtagcaaacgcgagtttgcccatgctgtatcaacc
ctcgatgttgccgccgatattggcccaggtttagcgaaagcttgtatcgctggccgcgtt
aatggcgaattaaaagatgcttgcgatctcattgaaaccgatgcagaactatcaatcatt
accgccaaagacgaagaaggtgttgaaattcttcgccattcttgcgcgcatttattaggt
cacgcgattaagcaaatgtggccagaaaccaagatggcgattggtcctgttattgataac
ggcttctactatgatatcgaccttgagcataagttgactcaagatgacatcgacgcgtta
gaaaagcgcatgcttcaactggccaaaactaactatgacgtagttaaacgtgtagttagc
tggcaagaagcgcgcgataccttcgcagcgcgtggcgaagattataagattgccattctg
gatgaaaacatcagcaaagatgcaacgcctgcgctgtatcatcacgaagaatacacagac
atgtgtcgtggaccgcacgtaccgaacatgcgtttttgccaacactttaaattaatgagc
attgccggcgcttattggcgtggtaactcagaaaacaagatgttgcaacgtatctatggt
accgcttgggcagataaaaaagccttgagcacacacttaacccgtcttgaagaagcggct
aagcgtgatcaccgtaaaatcggtaagcagctcgacttgtatcacatgcaagaagaagca
ccgggtatggtgttctggcataacgacggttggagcatcttcctcgaattagaaagattc
attcgccgtaagttaaaccaatacacttaccaagaagtgaaaggcccattaatgatggac
cgcgtgttgtgggaacgttctggtcactgggataaatactcagaagccatgttcacgacc
agcagcgaaaaccgcgaatatgctatcaagccgatgaactgcccaggccacgtgcagatc
ttcaaccaagggttgaaatcttaccgcgacctgccattacgtatggcagagtttggttgc
tgtcaccgtaatgaaccttctggttctttgcacggattaatgcgcgtacgcggctttacc
caagatgacgcccatattttctgtactgacagccaagtccaagaagaagtgagtgcctgt
atccagatggtttacgatacatacgccaccttcggctttgaaaatatcgtggtaaaactg
tcgactcgtcctgaaaaacgtatcggtgacgatgcaatgtgggacagagcggaagaagca
cttaagcaagcgctgcgtgacaataatattgaattcactattttgccaggtgaaggcgcg
ttctacggaccaaaaatcgaatttactttacacgattgtttggaccgagcgtggcaatgt
ggtactgtgcagctcgattatgcgttgccaagccgtcttggtgcaacttatgttgccgaa
gataacagccgtcagacccctgtgatgatccatcgcgctattttaggctctttggaacga
ttcttgggtatcttgatagaagaatatgcaggacgtttcccaacttggttagccccaatg
caagttgtcgtgatgaatatcaccgataaacaggctgattatgttgaagaagtcgtaaaa
ttcttcaaagaacaaggtattcgagcgtcttttgacttgaggaatgagaaaataggcttt
aaaatacgcgagcacaccttaaggcgtgtcccttatttgttggtcgttggcgatcaagaa
atggaaaataaggaagtagcggtgcgtacccgtgatggtatcgatttaggtaagatgcga
cttgaagatttcgccactaaaatccatcaacagatttcgctccgtagtctcaaattgttg
gaggaatag
DBGET
integrated database retrieval system
