Shewanella sp. Pdp11: AYJ58_13330
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Entry
AYJ58_13330 CDS
T11329
Name
(GenBank) MATE family efflux transporter
KO
K26939
MATE family, multidrug efflux pump
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_13330
Transporters [BR:
shep02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
AYJ58_13330
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
AUD60405
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Position
3047717..3049096
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AA seq
459 aa
AA seq
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MNHSGYQAKRLIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLWLPAILF
VQGLLMAFTPLFAHYNGANNQKAIQPLAFQGAYLAIIGGICVMIFLASAPFVLGHMDLEP
ELYRLTIGYLDGILWGAPAFVLYQVLRGCSEGISYTLPTMVIGFVGLAVNIPANYIFIYG
HFGVPPMGGAGCGIATALVFWAMLIAMTIYMQVHKKFAALAPFSKFHRPDFETMKKMTKL
GMPIAMALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIGY
YLGRDRADISAVVAKVGLWLALSLALSTAVLTVIFRFQIAELYNGDPEVVALAGSLMLMA
ALYQLSDSVQVVAAGALRGYKDTRSAFYITLFSYWGIGMSLGYTLAYTDHIVPAMGAHGF
WTGLIAGLTSAALLFFIRLRYIQKHGVHLSLIEGDSVHH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattcaggctatcaagccaaacgtttaatccaattggcactgccagtgctaata
gcacaggtcactcaaaccatgatgggctttattgataccgtcatggcgggccgtgttagt
gcggtcgatatggccgctgttgcggtcggcactagtctttggttacccgctattctgttc
gtccaaggtttgctgatggcttttacacctttatttgcccactacaatggagcgaataat
caaaaagccattcaacctttagcctttcaaggggcctatcttgccatcattggcggcatt
tgcgtgatgattttcctcgcatcagcgccctttgtacttggccatatggatttagaaccc
gaattataccgcttaaccattggatatctcgacggtattttatggggcgcacctgcattt
gtgctttaccaagtactacgaggctgtagtgaggggatttcttacactttaccgactatg
gtcattggctttgtcggcttagcggtgaacatacccgccaactacatctttatttacgga
cactttggcgtacctccgatgggcggtgcaggctgcggtattgccactgccttggttttt
tgggccatgctgattgccatgactatttatatgcaagtacataagaaatttgcggcctta
gctcctttcagtaaatttcatcgtcctgactttgaaacgatgaaaaaaatgaccaaactc
ggtatgccgatagcaatggcgctgttttttgaagtgagtttatttgccattattgcgttg
ttactcgccccattaggtgcaactgtggtggcaagtcaccagatagcactgaacttttct
gcgattgtatttatgctgccgttgtctattggtatcgcagtatcgattagaattggctac
tacttgggtcgcgatcgtgctgatatttctgcagtggtcgccaaagtgggtttatggtta
gcgctatcccttgcattatcaactgcagtcttgaccgtcatatttagattccaaattgca
gagctttataatggtgatcctgaagtggtcgctttagctggcagcttgatgttaatggcg
gcactgtatcaattatcggattcagtccaagtggttgccgccggagccctacgtggttat
aaagatacccgcagtgccttttatatcacgctgttttcctattggggcataggtatgtca
ctcggctataccttggcttatacggatcatatcgttcctgccatgggcgcacacggtttt
tggaccggattgattgcaggtctcacctcggcggcgctgctatttttcattcgactgcgt
tacatccaaaaacatggtgtgcatttaagcctaattgaaggcgacagcgtgcatcactaa
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