KEGG   Shewanella sp. Pdp11: AYJ58_13675
Entry
AYJ58_13675       CDS       T11329                                 
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
shep  Shewanella sp. Pdp11
Pathway
shep03010  Ribosome
Brite
KEGG Orthology (KO) [BR:shep00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    AYJ58_13675 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:shep03011]
    AYJ58_13675 (rpsA)
Ribosome [BR:shep03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    AYJ58_13675 (rpsA)
  Bacteria
    AYJ58_13675 (rpsA)
SSDB
Motif
Pfam: S1 S1_RRP5 Spt6_S1 PCB_OB OB_RRP5_4th
Other DBs
NCBI-ProteinID: AUD60467
LinkDB
Position
complement(3128492..3130159)
AA seq 555 aa
MTESFADLFEQSLQTLEFRPGSIVRGTVVSIKNGMVLVDAGLKSESPIPAEQFKNAQGVL
EIAVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFATR
YNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEDAVSEYKKGDEIHAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGTIVNGTVSAVDAKGVTVELADTVEGYIRV
ADISRERIEDASTVYNVGDAIEAKFMGVDRKNRSISLSIKAKDEAEEKEVMATLNKQDDA
VISNAMAEAFKAARK
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgactgaatcttttgctgatctatttgaacaatcccttcaaactctggaattccgtcca
ggttctatcgttcgtggtactgttgtatcaatcaaaaacggtatggtactggttgacgcg
ggtctgaagtctgaaagcccaatcccagctgaacaattcaaaaacgctcaaggtgtttta
gaaatcgctgttggtgatgaagttgacgtagctcttgactctgttgaagacggcttcggt
gagactcaactgtctcgcgaaaaagcgaaacgtcatgaagcttggatcgttctggaaaaa
gcttatgaagatgctgaaactgtaatcggtatcatcaatggtaaagttaaaggcggtttc
actgttgaattaaacggtatccgtgccttcttaccaggttctctagttgacgtgcgccca
gttcgcgacaccgctcacttagagtacaaagaattagaattcaaagttatcaagctagac
cagaagcgtaacaacgttgttgtttctcgtcgtgcagttatcgaatcagaaagcagcgct
gagcgtgatgcactgttagaaaacctgcaagaaggtcaagcagttaagggtatcgttaag
aacctgactgactacggtgcattcgtagatttaggtggtgttgacggtctgctacatatc
acagatatggcgtggaaacgtgttaaacatccatcagaaatcgtcaatgttggcgatgaa
atcaacgttaaagtactgaagtacgatcgtgagcgcactcgtgtatctctaggtctgaaa
caacttggcgaagatccatggttagaaatcagcaaacgctacccagaaaacacacgttta
actggtcgcgttactaacctaactgactacggttgcttcgtagaaatcgaagaaggcgtt
gaaggtctggttcacgtttctgaaatggattggactaacaagaacattcacccatctaaa
gttgttaacttaggtgatgaagttgaagttctggttctggacatcgatgaagagcgtcgt
cgtatttctctaggtctgaaacaatgtaagaccaatccatgggatgacttcgcaactcgt
tacaacaaaggcgacaaggtttctggtaagatcaagtcaatcactgacttcggtatcttt
atcggtcttgacggcggtatcgatggtctagttcacctgtctgacatttcttggaacggt
actggcgaagacgcagtttctgaatacaagaaaggcgatgaaatccatgcagtggttctg
tctgtagatccagagcgtgagcgcatcagcttaggtgttaagcaaactgaagatgatcca
ttcaacgcatacttggctgacaagaagaaaggtactatcgtaaacggtactgtttctgct
gttgatgctaaaggtgtgactgttgaactggctgacactgttgaaggttacatccgtgta
gctgacatttcacgtgagcgtatcgaagatgcatctactgtctataatgtaggtgatgca
atcgaagctaagttcatgggtgttgaccgtaagaaccgctctatcagcctgtcaatcaaa
gcgaaagacgaagctgaagagaaagaagtaatggcgactctgaacaaacaagatgacgct
gttattagcaatgcaatggctgaagcgtttaaagcagctcgtaaataa

DBGET integrated database retrieval system