Shewanella sp. Pdp11: AYJ58_13675
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Entry
AYJ58_13675 CDS
T11329
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
shep Shewanella sp. Pdp11
Pathway
shep03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AYJ58_13675 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shep03011
]
AYJ58_13675 (rpsA)
Ribosome [BR:
shep03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AYJ58_13675 (rpsA)
Bacteria
AYJ58_13675 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AUD60467
LinkDB
All DBs
Position
complement(3128492..3130159)
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AA seq
555 aa
AA seq
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MTESFADLFEQSLQTLEFRPGSIVRGTVVSIKNGMVLVDAGLKSESPIPAEQFKNAQGVL
EIAVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFATR
YNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEDAVSEYKKGDEIHAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGTIVNGTVSAVDAKGVTVELADTVEGYIRV
ADISRERIEDASTVYNVGDAIEAKFMGVDRKNRSISLSIKAKDEAEEKEVMATLNKQDDA
VISNAMAEAFKAARK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcttttgctgatctatttgaacaatcccttcaaactctggaattccgtcca
ggttctatcgttcgtggtactgttgtatcaatcaaaaacggtatggtactggttgacgcg
ggtctgaagtctgaaagcccaatcccagctgaacaattcaaaaacgctcaaggtgtttta
gaaatcgctgttggtgatgaagttgacgtagctcttgactctgttgaagacggcttcggt
gagactcaactgtctcgcgaaaaagcgaaacgtcatgaagcttggatcgttctggaaaaa
gcttatgaagatgctgaaactgtaatcggtatcatcaatggtaaagttaaaggcggtttc
actgttgaattaaacggtatccgtgccttcttaccaggttctctagttgacgtgcgccca
gttcgcgacaccgctcacttagagtacaaagaattagaattcaaagttatcaagctagac
cagaagcgtaacaacgttgttgtttctcgtcgtgcagttatcgaatcagaaagcagcgct
gagcgtgatgcactgttagaaaacctgcaagaaggtcaagcagttaagggtatcgttaag
aacctgactgactacggtgcattcgtagatttaggtggtgttgacggtctgctacatatc
acagatatggcgtggaaacgtgttaaacatccatcagaaatcgtcaatgttggcgatgaa
atcaacgttaaagtactgaagtacgatcgtgagcgcactcgtgtatctctaggtctgaaa
caacttggcgaagatccatggttagaaatcagcaaacgctacccagaaaacacacgttta
actggtcgcgttactaacctaactgactacggttgcttcgtagaaatcgaagaaggcgtt
gaaggtctggttcacgtttctgaaatggattggactaacaagaacattcacccatctaaa
gttgttaacttaggtgatgaagttgaagttctggttctggacatcgatgaagagcgtcgt
cgtatttctctaggtctgaaacaatgtaagaccaatccatgggatgacttcgcaactcgt
tacaacaaaggcgacaaggtttctggtaagatcaagtcaatcactgacttcggtatcttt
atcggtcttgacggcggtatcgatggtctagttcacctgtctgacatttcttggaacggt
actggcgaagacgcagtttctgaatacaagaaaggcgatgaaatccatgcagtggttctg
tctgtagatccagagcgtgagcgcatcagcttaggtgttaagcaaactgaagatgatcca
ttcaacgcatacttggctgacaagaagaaaggtactatcgtaaacggtactgtttctgct
gttgatgctaaaggtgtgactgttgaactggctgacactgttgaaggttacatccgtgta
gctgacatttcacgtgagcgtatcgaagatgcatctactgtctataatgtaggtgatgca
atcgaagctaagttcatgggtgttgaccgtaagaaccgctctatcagcctgtcaatcaaa
gcgaaagacgaagctgaagagaaagaagtaatggcgactctgaacaaacaagatgacgct
gttattagcaatgcaatggctgaagcgtttaaagcagctcgtaaataa
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