Shewanella sp. Pdp11: AYJ58_14625
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Entry
AYJ58_14625 CDS
T11329
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00020
Citrate cycle (TCA cycle)
shep00480
Glutathione metabolism
shep00720
Other carbon fixation pathways
shep01100
Metabolic pathways
shep01110
Biosynthesis of secondary metabolites
shep01120
Microbial metabolism in diverse environments
shep01200
Carbon metabolism
shep01210
2-Oxocarboxylic acid metabolism
shep01230
Biosynthesis of amino acids
shep04146
Peroxisome
Module
shep_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shep_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AYJ58_14625
09102 Energy metabolism
00720 Other carbon fixation pathways
AYJ58_14625
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AYJ58_14625
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AYJ58_14625
Enzymes [BR:
shep01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
AYJ58_14625
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NCBI-ProteinID:
AUD60647
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Position
complement(3363233..3365458)
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AA seq
741 aa
AA seq
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MKDNSSTIIYTETDEAPALATLSLLPIIRTFTDAAGVAVETRDISLSGRIIASFPEQLTD
AQKIGDHLTELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDA
EKSIKTRYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWAKDSKSHVAHMTE
GDFYGSEQSVTLSNAGSVNIVLTQKDGQEVVLKSGLKLLAGEIIDAAVLSKKALVSFYER
EIDNAKAEDVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHAALFAELGVDVNNGFG
DVYAKIATLPADSRAEVEADIAAVYAARPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLHDTKAMIPDRCYAGIYQETIAFCKEHGAFDPKTMGSVPNVGLMAQKAE
EYGSHDKTFEMPTDGVVNVVDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDSKRAHDAQIIAKVQQYLPEHDTDGLDISIMSPEEATRLSLARIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTKDEQLQAHFIPLAHALATNEQVIVAELNNAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcatcaacaattatttacactgaaacagacgaagcgccagcattggca
accctctcactcttaccaattatcagaacctttaccgacgccgcgggcgttgcggttgaa
acccgtgatatctcgttatcgggccgtattattgccagtttccctgagcaattgaccgac
gcacaaaagattggcgaccatctgactgagcttggcgagttagcaaatcagccagaagcg
aacatcattaagttaccgaatatcagtgcttcaattccacaattaaaagcctgtatcctt
gaactgcagcaaaaaggttatgacatcccaaattatccggatgagccaaaaaccgacgct
gaaaagtcaatcaaaacacgttacgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaactcagatcgccgcgcgccattatcggtgaaaaacttcgccaagaaaaac
ccgcattccatgggtaaatgggctaaggattctaagtctcacgttgcccacatgactgaa
ggcgatttctacggtagcgagcagtctgtgactttatctaatgcgggcagcgttaatatc
gtgctgacgcaaaaagatggccaagaagtggtgctcaaatcgggtcttaagctgctggct
ggcgaaattatcgatgctgcggtattgagtaaaaaagccttagtaagcttctatgagcgt
gaaatcgacaacgccaaagctgaagatgtgctgttatcgctgcatctgaaagccactatg
atgaaagtgtctgatcctattatgtttggtcacgctgtgaaggtattcttcaagccagta
tttgacaaacatgcggcgcttttcgctgaattaggcgtagatgttaacaacggttttggt
gatgtttatgccaagatcgcgacattacctgccgatagccgcgccgaagtcgaagccgat
atcgccgccgtttacgctgcacgtcccgcattggctatggttgactctgacaaaggtatc
accaatttacacgtgccaagcgacatcattatcgatgcgtctatgcctgctgcgattcgt
tcatctggccaaatgtggggaccagacggtcaactgcatgacactaaagccatgatccct
gatcgttgttatgccggtatctaccaagaaacaattgccttctgtaaagagcacggtgct
tttgatcctaaaaccatgggcagcgtgccaaacgtgggcttgatggcgcaaaaagccgaa
gagtacggcagtcacgataaaacctttgaaatgccaactgacggcgtggttaacgttgtc
gatgccagcggtaaggtattgatgagccacaatgtggaagcgggcgatatctggagaatg
tgccaagttaaagacgcacctatccgtgattgggtcaaactggccgtgcgccgtgcccgt
ttaagcaatactcctgcggtattctggttagatagcaaacgtgcccacgatgcgcaaatc
attgcaaaagtgcagcagtatctgccagaacatgacactgatggcttagatatcagtatt
atgtctccagaagaggcgacgcgtttgtctttggctcgcatcaaagaaggtaaggatacg
atttcagttacgggtaacgttttacgtgactacctgactgacttgttccctatcctagag
ctaggcaccagtgctaaaatgctgtcaatcgtgccgttaatgaacggtggcggtctattt
gaaactggcgcgggcggtagtgcacctaagcatgtgcaacagcttgagaaagaaggtcac
ttacgttgggattcactgggtgaattcttggctctggcggcgtctcttgagcatttaagc
caaactgtcggtaatccaaaagcccaagtgttagctgataccttagatcaagccattggc
caattcttagatagcaacaaatcgccatcaagaagagttggtgaactggataaccgtggc
agccatttctacttagccatgtactgggcacaagccttagccgcgcaaacgaaagatgag
cagttacaagctcactttattccgttagcgcatgcactggcgacgaatgagcaagtgatt
gtcgctgagttaaacaatgcacaaggtgcaccagttgatttaggtggttactaccgttta
gatgcggctaaggctgaaaaagctatgcgtccaagcgagacgttgaacaagctgttgatt
gcttaa
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