Shewanella sp. Pdp11: AYJ58_14725
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Entry
AYJ58_14725 CDS
T11329
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shep03032
]
AYJ58_14725
03400 DNA repair and recombination proteins [BR:
shep03400
]
AYJ58_14725
BRITE hierarchy
Other DBs
NCBI-ProteinID:
AUD60664
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Position
complement(3387108..3389750)
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AA seq
880 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKEFIVKSSVGHIRDLPTSSTSEGNEKVKSAAEVKKMSP
EEKAQYKKVKDQQALVSRMGVNPEKGWAAKYQILPGKEKVVKELQALADSADQIYLATDL
DREGEAIAWHLQEVIGGDPSRYQRVVFNEITKSAIQDAFSKPSTLDTNMVNAQQARRFLD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVRLVVERESEIKAFVPEEFWDVHAELNTPAQE
ALRMEVVKHLDAAFNPINEQQAMAAVQALSAASYTVLAREDKATQSKPSAPFITSTLQQA
ASTRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEAVESLRNMIAKEFGDKYLPAEP
IRYGSKEGAQEAHEAIRPSNVQVQAATLSDMERDAQRLYELIWRQFVSCQMTPAQYDATK
LTVKAGDYELKATGRTLRFDGWTRVQTALKKKNEEDNTLPFVAQGDVLALKELQPKQHFT
KPPARYSEASLVKELEKRGIGRPSTYATIISTIQDRGYVKVENRRFYAEKMGEIVSERLV
SSFADLMSYDFTASMEQTLDDVARGELDWKKVLDGFYADFTKQLEKAELDPEEGGMRLNQ
MVMTDIKCPTCGRPMGIRTGTTGVFLGCSGYELPPKERCKTTMNLTPGVEAISENSEDAE
TDALRAKHRCGICGTAMDSYLIDEKRKLHVCGNNPICEGYEVEEGQFKIKGYEGPLIECD
RCGNDMELKNGRFGKYFGCTNSECKNTRKLLKNGEAAPPKEDPIYLPDLKCSKSDAHFVL
RDGAAGIFLAASTFPKSRETRAPLVEELVQYRELLWPKYQYLADAPVTDDEGNKAAVKFS
RKTKEQYVATEVDGKATGWSAHYVNGKWVSETTKKAKKSA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctagttattgtcgaatcaccggccaaagctaagactattaataaatat
cttggcaaagaattcatcgttaaatcgagcgtaggtcacatccgtgatctgccgacatca
tcgacttcagaaggcaatgaaaaggttaaatccgctgccgaagttaagaaaatgtcgcca
gaagaaaaagctcaatataaaaaggtgaaagatcagcaagcgctggtgtctcgcatgggc
gtaaaccctgaaaagggctgggcggctaagtatcaaattttgccgggtaaagaaaaggtc
gttaaagagttacaggcacttgccgattctgccgaccaaatctatctcgcaaccgactta
gaccgtgagggagaagctatcgcctggcatttgcaagaggtgattggtggtgatccttca
cggtatcaacgtgtggttttcaacgaaattactaagtctgcgattcaagacgcttttagc
aagccgtcgacactcgacactaacatggttaatgcccagcaagctcgtcgcttcttagac
agagttgtcggttttatggtgtcgccactgctgtggaaaaaagtcgctcgcggtttgtcc
gcaggtagagtgcagtcggttgccgttcgcttagtggttgaacgtgaaagcgaaattaaa
gcttttgtgcctgaagagttttgggatgtacatgcagagctcaatacgccagcccaagaa
gctttgcggatggaagtggtaaagcatctagatgctgcctttaatcccatcaatgaacag
caagcgatggccgcggttcaagcgttatcggcggcaagttataccgtgctggcccgcgaa
gacaaagcgacccaaagcaaaccatctgcgccctttattacgtcgacattgcaacaggcc
gcgagtacgcgcttaggtttcggtgtcaagaagaccatgatgatggctcagcgactttat
gaagctggtcatatcacttatatgcgtaccgactcgaccaatttgagtcaagaagccgtt
gaaagcttgcgcaatatgattgccaaagaatttggtgataaatatctacccgctgaaccg
attcgctacggttctaaggaaggcgcacaagaggctcacgaagcgattcgtccatcgaac
gttcaggtacaagctgcgaccttatcggacatggagcgtgatgctcagcgcctatatgag
ctgatttggcgccagtttgtctcgtgtcagatgacgccagcacaatatgatgccactaag
ttgacagtcaaagcgggtgactatgagctcaaggcaacgggacgtactttacgttttgat
ggttggactcgggtgcaaacagcactcaagaagaaaaacgaagaagacaatacgttgcca
tttgtggcacaaggcgatgtattagcattgaaagagttgcagcctaagcaacactttact
aagccgccagcgcgatacagcgaagcctctttagttaaagaactagagaaacgtggtatt
ggccgtccatcgacctacgcaaccatcatttcaacgattcaagatcgaggttatgtaaaa
gttgagaatcgtcgtttctatgccgaaaaaatgggtgaaattgtcagcgagcgattagtc
agcagttttgctgatttgatgagctatgactttaccgccagcatggagcaaacattggat
gatgtggctcgcggcgagttagactggaaaaaagtgctcgatggtttctatgctgacttt
actaagcaattagaaaaagcggagctcgatcccgaagaaggtggtatgcgtctgaaccaa
atggtgatgacggatatcaagtgcccaacctgcggccgtcctatggggatacgcacggga
acaactggggttttcctgggttgttctggttatgaattaccgcctaaagagcgttgtaag
acaacgatgaacctcacacctggcgttgaggcgatcagtgaaaacagtgaagatgccgag
actgatgcgctgcgtgctaagcatcgatgtggtatttgcggtaccgcaatggacagttac
cttatcgatgagaagcgtaagctacatgtctgtggtaataacccgatttgtgaaggttat
gaggtcgaagaaggccagttcaagatcaaaggctatgaaggtccgctaatagagtgtgat
cgttgtggcaacgacatggaactgaaaaacggccgttttggtaagtattttggttgtacc
aatagcgaatgtaaaaatacccgtaaattactcaaaaacggcgaggctgcgccaccaaaa
gaagatcctatctatttgcctgatctgaaatgcagcaaatcggatgcccatttcgtatta
cgtgatggtgcagcagggatcttcttagcggccagtactttccctaaatcacgggaaacc
cgtgcacctctggttgaagagctggttcaataccgcgagctgctgtggcctaagtatcaa
tatttagccgatgcgcccgtcactgatgacgaaggtaataaagctgcggtgaagtttagc
cgtaagacgaaagagcaatacgttgcgactgaagtcgacggtaaagctactggttggtca
gcccattacgttaatggcaagtgggtgagtgagactaccaagaaagccaagaaaagcgca
tag
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