Shewanella sp. Pdp11: AYJ58_16085
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Entry
AYJ58_16085 CDS
T11329
Symbol
fadJ
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
shep Shewanella sp. Pdp11
Pathway
shep00071
Fatty acid degradation
shep00280
Valine, leucine and isoleucine degradation
shep00310
Lysine degradation
shep00362
Benzoate degradation
shep00380
Tryptophan metabolism
shep00410
beta-Alanine metabolism
shep00640
Propanoate metabolism
shep00650
Butanoate metabolism
shep00907
Pinene, camphor and geraniol degradation
shep00930
Caprolactam degradation
shep01100
Metabolic pathways
shep01110
Biosynthesis of secondary metabolites
shep01120
Microbial metabolism in diverse environments
shep01200
Carbon metabolism
shep01212
Fatty acid metabolism
Module
shep_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AYJ58_16085 (fadJ)
00650 Butanoate metabolism
AYJ58_16085 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
AYJ58_16085 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AYJ58_16085 (fadJ)
00310 Lysine degradation
AYJ58_16085 (fadJ)
00380 Tryptophan metabolism
AYJ58_16085 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AYJ58_16085 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AYJ58_16085 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AYJ58_16085 (fadJ)
00930 Caprolactam degradation
AYJ58_16085 (fadJ)
Enzymes [BR:
shep01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AYJ58_16085 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AYJ58_16085 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AYJ58_16085 (fadJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
AUD60905
LinkDB
All DBs
Position
complement(3718792..3720912)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKTFNLIRRDDGIAVLTMDVPGETMNTLKAQFGPEISEILAEIKSDSSIRGLVLISGKK
DSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALKIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLVNQVLEGTSFGRNIIFDQATKQVEKK
TQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKDISEKGLSNALAYAYKLLDK
GVKRRHMTPAARDNLMALMTTTTEYKGVNDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDE
VGIDVGAKISPILEKELGGRFKAPAAFDKLLGDDRKGRKNGKGFYQYGASSKKAKAVDES
VYGVLGIKPGTNKDAKAVAERCVVQMLNEAVRCLDDGIIASPRDGDIGAIFGIGFPPFLG
GPFHYIDTLGAANLVRILEGYQSQLGSRFEPCERLKTMAQENAHFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacctttaatttaatccgccgcgacgacggcattgccgttttgactatggat
gttcctggcgaaaccatgaacaccctaaaagcacagtttggtcctgaaatcagtgagatt
ttagccgaaattaagagtgattcgagcattcgcggtttagtgctgatctcgggcaaaaaa
gattctttcgtcgcgggcgcggatatttctatgctcgatgcctgtaaaacggcgggcgat
gccaaagccttatcccagcaagggcatgtggtttttaatgagttagaagccttaaaaatt
cctgtggttgcggcaatccacggtgcctgtttaggcggtggtttagagttagccttagcc
tgtcatcaaagggtatgtagcgacgatggcaagactatgctcggcgtaccggaagtccaa
cttggcttattgccaggcggcggcggcactcaacgtctgccacgtttagttggtattacc
accgccttagatatgatgctaactggcaaacaaattcgtcctaaacaagccttgaaaatg
ggcttagtgaatgatgttgtaccgcaaaccattttgctgcaaaccgcagttgagatggcg
cttgcggggaaacgtgcaccgaaacctgttaaaaagtcactcgttaatcaagtgcttgaa
ggcacgagctttggccgtaatattattttcgatcaagcgactaaacaggtcgaaaagaaa
acccaaggtaattatcctgcgcctgccaagatcattgactgcgtgcgtcaaggtattgcg
aaggggatgcaaaaagggctagaagtcgaagcgagtcactttgccgaactagtggtatcg
aaagagtctgaagcgctgcgcagtattttctttgcgaccacagaaatgaagaaagaaacc
ggcgcagaaggcgcgagcccacgcaaagtcaaaaaagcggtgatcttaggtggcggttta
atgggtggcggtatcgcatctgtcacaacaaccaaggccaaaatccccgttcgcgtaaaa
gacatcagcgaaaaaggtttaagcaatgcattggcctacgcctacaagttgttggataaa
ggggttaagcgccgccatatgacgcctgctgcccgtgacaatttaatggcactgatgacc
acaacgactgaatataaaggcgttaacgatgccgatatcgttgtggaagcagtatttgaa
gacctagcgcttaagcatcaaatggtgaaagacatagagcgtgagtgtggtgagcacact
atttttgcgtcaaacacctcatctttgcctattagccaaatcgccgaggcggcgacacgt
cctgagaatgtaattggtctgcattatttctcgccagtagagaaaatgccgcttgtggaa
gtgattgcccacgctaaaacctcgccagaaaccattgcgacaaccgtagcctttgcccgt
aagcaaggtaaaacaccgatagtggtgcaggatggcgcgggtttctacgtgaaccgtatt
cttgcgctttacatgaacgaggctgcgcaattattacttgaaggccaaagtgttgaacat
cttgataaagcgctggttaagtttggtttccctgtgggccccattactttacttgacgaa
gtgggtatcgacgtgggcgctaagatttcaccaatcctcgagaaagaattgggtggacgt
tttaaagcgccagcggcttttgacaagcttttgggtgacgatcgtaaaggccgtaaaaat
ggtaaaggtttctatcaatacggcgcatcgagcaagaaagctaaagctgtcgatgagagt
gtttatggcgtgttaggtattaagcctggcaccaataaagacgccaaagcagtagccgag
cgttgtgtggtgcaaatgcttaatgaagcggtgcgttgcttggatgatggaattattgca
tcgccaagagatggtgatattggcgccattttcggtattggcttcccaccattcctcggt
ggtccattccattatattgacactttgggcgccgcgaacttagtgcgaattcttgaaggt
tatcaaagtcaattaggcagcagattcgaaccttgtgagcgcttgaaaaccatggctcaa
gaaaacgcgcactttttctaa
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