Shewanella sp. Pdp11: AYJ58_16615
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Entry
AYJ58_16615 CDS
T11329
Name
(GenBank) Na+/H+ antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_16615
01504 Antimicrobial resistance genes [BR:
shep01504
]
AYJ58_16615
Transporters [BR:
shep02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AYJ58_16615
Antimicrobial resistance genes [BR:
shep01504
]
Gene variants
Tetracycline resistance genes
Transporters
AYJ58_16615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
AUD60990
LinkDB
All DBs
Position
complement(3832346..3833908)
Genome browser
AA seq
520 aa
AA seq
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MTVMNYADSALSLLPPAVAIVLAILTRRVLLSLGLGILIGALLLNQFSPVATGEFVFNGV
KGLFWTGEGLNSWNLYILGFLIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMF
LGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
LIGGILTAHGFADTGHLSIFIQMIPMNFYAIFSLLLLLFVVFMGLDVGPMREHELNAQRG
NLYDESKGLPPGANADLPEAETGKILGLFLPITVLVFATLYFMINSGAQVLAAEGIEFNI
ISAFEKTDVSSSLFFGALIGLAISLILNLVQGVEKSLIVKGIVQGARSMLPAIYILLFAW
TIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGITAFSTGTSWGTFGIMLPIAADM
AMGSHTGMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYALIAAF
ISLTGYVVLGFTESVSAGLVACALVFVLSVIVLKIKSKSV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgactgttatgaattatgccgattcggcactttccttgctgccgcctgcggtggctatt
gtgttggcgatcttaactcgccgtgtactgctttctttggggttaggtattttaattggt
gctttattgctcaatcaattttcacctgtagcgacgggtgaatttgtatttaatggcgtt
aaaggacttttttggacgggcgaaggccttaattcgtggaacttatatattctcggtttc
ttaattgtactgggaatgatcacagcgttaattaccgtcagtggcagcgcgcgggctttt
gccgattgggcgcgtttacatatacgtaataaacgtgatgctaaactattaaccatgttt
ttagggtgtgtggtttttattgacgactatttcaatagcttagtcgtaggttcggtcgct
agacctgttaccgaccgttattatatttcccgcgctaagttagcttatttattagattcg
actgccgctcctgtgtgcgttatttctcctgtatcaagttggggcgcctatattattgcg
cttattggtggaatattaacggcccatggttttgctgatacgggtcatttgagtattttt
attcaaatgatcccaatgaatttctacgcaatcttctctttgttattattacttttcgta
gtctttatgggattagatgttgggccaatgcgcgagcatgaactcaatgcccaacgtggt
aatttatacgatgagtcaaaaggattaccgccaggggcgaatgcggatttacccgaagcc
gaaaccggtaagatcttaggattattcctgccgattactgtgctggtatttgcgaccctg
tattttatgattaacagcggcgctcaagtacttgccgctgaagggattgaatttaatatt
atttcagcgtttgagaaaacagatgtcagttcatcccttttctttggtgcattaatcggt
ttagcgatttcgctgatattgaatttagtccaaggcgttgagaaatccctgatagtcaaa
ggcatagtgcagggcgcccgttctatgctgccagccatttatatcttgttatttgcttgg
accatcgctggcgtgattggtcaactcgaaaccggcaagtttatggcgagtctcgcgacg
ggtaatattccattcgcctttttgccagcgctcatgtttgtgttagcgggtattactgcg
ttctcaactggtactagctggggcacgttcggtattatgttgccgattgctgcggatatg
gcgatgggaagtcacactggcatgatgttgcctatgcttgcctctgtgctggctggcgcg
gtatttggcgatcactgttcaccgatttccgatactacgattttgtcgtctacgggcgcg
agttgtcaccatatcgaccatgtcgtcactcagctaccgtatgcattgattgcggcattt
attagcttaacaggttatgtcgtacttggatttactgaatcagtctctgcgggtttagtc
gcgtgtgcgctagtatttgtgctcagtgttattgtgctgaaaattaagtctaaaagtgtt
taa
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