Shewanella sp. Pdp11: AYJ58_17685
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Entry
AYJ58_17685 CDS
T11329
Name
(GenBank) deoxyribonuclease HsdR
Organism
shep Shewanella sp. Pdp11
Other DBs
NCBI-ProteinID:
AUD61195
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Position
complement(4086230..4090216)
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AA seq
1328 aa
AA seq
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MSEYQLVEKPLLNQLNSMGWDVTDLGQGVPTDPTTSFRSSFREVILKDIFKTSVHSINTT
DDGKPWLTGSQLDVLLDDVTDFGTHKLLAANEEFIGRLHKWQLDRNELTGEEDPVVKLID
FDNWDNNTFTAINQFRVDTPGLGKEHIRPDIVLFVNGLPLVVIECKEHSQHCSNPMAAGI
DQLRRYADLREPEHSKLREGEPALFFTNQLMISTYGDDCKVGTITSNEDYYFNWKTIYPD
TEPYIAPEIGAHRSQEKLVQGMLHPQRLLDITRCFTLFMDTDNGPRVKVICRYQQFRAVQ
KIIERMEQGETGIQRSGVVWHTQGSGKSLTMVFLVRKLRRHPELKSYKVLMVNDRSDLEE
QLTNTAALIGDAVVEIKSTKDAKEKLANDTSNTNMVMVHKFREQDSCFLPDSVRKLLSKH
LAEAKEAGDVERIEELEADFDAEIVMHRPFGVINAGEKVLILVDEAHRTQRGGKDRPSLS
DNLFDAFPKSTRVAFTGTPLIADHQTYPTWKRFGVSQEKAYIDKYKLQDAVDDGATLKIL
YEGKTADSAIYDKAGFDTKFEDLFADRTEEELREIRKKYGAEGDILEAEKRIEEIAEDIV
KHYLRQILPAGFKAQVVCSSKQAAIHYQTYIEKALAKEIERYKKQPEQCIDKAWLERLEF
LKTAVVISSDDTNEAASFTYARKQAKELKAVESFKKKFDHSKPNTGVAFLIVCDMLLTGF
DAPIEQVMYLDKKLREHNLLQTIARVNRTAKEKQRGYIVDYIGLAHHLRDALSMYSQDDQ
DDILKSLQNINSEVPVLESRYRRLLQLFTELKVHNIEAFVNQKLSIDEHYQVQLQAIAVL
EDPRQRDSFNVFLKKFLQSMDIIMPNSLADPYKTPMYQFVHIQAKARQRYQDDSMSFQGV
GAKIRHLVNEHLISLGINPKIKPIDLFSDAFMTHMGKEPDLQAQASEMEHAIRKHCKVNA
DDDPVFHKKMSEKLDEIIKKHSGNWEKMILELSVLRDEIDAGRGPNAQISDPFFDLIVSI
AFPNGEPVKPLDKVKACVEAVMEQLGENIGSLDFWEREDLISELEGKVEMRFLLSGVPQL
SELSEQLTTEVVALARRRELLILSEQALNERIDEIIEKLRAIDPEALQKQISEQPDLSLL
KYDLDGVDLYLAQELEQYESFYELALIKVATDINYAENEEDRSTLPYEVRKQFLLNAEDV
REALADIILSIQSELTFPDFEHKPIVALKETAKGSLFITVVVGLMTNFIYDVIKTTALQG
RQPIKDIVAKGGRVKSELPALVERNRAERGLNESNYRISYTEERNLVDDALKQLRDRNLS
NQDKNKHH
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtaccaattggttgaaaagccgttattaaaccagcttaatagcatgggctgg
gatgtaacggatttagggcaaggtgtgcctaccgacccaaccaccagctttcgcagctct
tttcgtgaagtcattttaaaagacatttttaaaacctcagtacacagcattaataccact
gatgacggcaagccttggctgacgggtagccaactggatgttttgctggatgacgtcacc
gattttggtactcacaaattactggcggccaatgaagagtttattggccgtctccacaaa
tggcagctcgaccgtaacgagctgaccggcgaagaagatccggttgttaagctgattgat
tttgataactgggacaacaacacctttaccgccatcaatcagttccgtgttgatacgcct
gggcttggtaaagagcacattcgtccagacattgtattgttcgtcaacggcctgccgctg
gtggtgattgagtgtaaagagcactcacagcattgctctaacccaatggcagcaggtatt
gaccagttgcgccgctatgccgacttgcgcgagcccgaacacagtaaactgcgcgaaggt
gaacccgctctgttctttaccaaccagttgatgatcagcacctacggtgatgattgtaaa
gtgggcaccatcacctcgaatgaagattactacttcaactggaaaaccatctaccccgat
accgagccctatattgcaccggaaattggcgcccatcgcagccaggagaagctcgttcag
ggcatgctccacccacaacggctacttgatattacccgctgctttaccttgtttatggat
accgacaacggtccacgtgtaaaagtgatttgtcgttaccagcaatttcgcgcggtgcag
aaaatcattgagcgtatggagcagggcgaaacgggcattcaacgttcaggtgtggtttgg
catacccagggaagcggaaaaagcctgaccatggtgttcttggtgcgtaagcttcgtcgc
catccagagctgaaaagttacaaggtactaatggttaacgaccggagtgatcttgaagag
caactgaccaataccgcagcgttaattggtgatgcggtcgttgagatcaagagcaccaag
gatgcaaaagagaagctggcgaacgacacctcgaacaccaatatggtgatggtgcataag
ttccgcgagcaagatagctgctttctgccggactctgttcgtaagctgttatctaagcat
cttgccgaagcaaaagaagcgggtgacgtggagcgtattgaagagctggaagctgacttt
gacgctgaaattgttatgcatcgtcctttcggcgtgatcaatgccggtgaaaaagtcctg
atcttggtggatgaggcgcaccgcacccagcgaggcggaaaagaccggccaagtctttcg
gacaacttgtttgatgctttccccaaatctacccgagtggcattcacaggaacgccgctt
atcgctgaccaccagacttacccaacctggaagcgctttggcgtcagccaagaaaaagcc
tatatcgacaaatacaagcttcaggatgccgtcgatgatggtgcaacgttaaaaatcctc
tacgaaggtaaaaccgcagatagcgcgatttacgacaaagcggggtttgataccaagttt
gaagatctctttgcggacagaacggaagaagagctaagagagatccgtaaaaaatacggt
gctgaaggtgatattcttgaggcagaaaagcgcattgaggaaattgctgaggacatagta
aaacactacttgcgacagattttgcctgcaggctttaaagctcaggtagtgtgctcttct
aagcaagcagcgattcattaccaaacctacattgaaaaagcgctggcgaaagaaatcgag
cgatacaaaaagcagccagagcaatgtattgataaagcttggcttgaacgccttgagttt
ttgaaaacagcggtagtgatctccagtgatgacaccaatgaagccgcgtctttcacctat
gccagaaagcaggccaaagagttaaaagccgtcgagagcttcaagaagaagtttgatcac
agcaagccaaataccggcgtcgctttcttgattgtctgcgacatgctgttgacgggcttc
gatgcgccaattgagcaggtgatgtatctcgacaagaaactacgagagcataacttgctg
caaacgattgcccgtgtgaaccgaactgcgaaagaaaagcagcgtgggtatatcgtcgat
tatatcggtctggctcatcacctcagagatgcgctgtcgatgtattcgcaggatgaccaa
gacgacattctgaaaagcttgcaaaacattaatagcgaagtgccggttttggaaagtcgt
tatcgccgtttgcttcagctgtttaccgaactcaaggttcacaacattgaagcgtttgtg
aaccagaagctcagtatcgatgagcactatcaagttcagcttcaagcgatcgcagtttta
gaagaccctcgccagcgtgacagtttcaacgtgttcttgaagaagttccttcaaagcatg
gacatcatcatgccgaactccttggcggacccttataaaacgccgatgtaccagtttgtg
catattcaagcgaaagcacgccagcgttaccaagatgacagcatgagcttccaaggtgtg
ggcgcaaaaattcgccaccttgtgaacgagcatctgatcagcctgggcattaatcctaaa
attaaaccgattgacctgttcagtgatgcgtttatgacgcacatgggtaaagagccggat
ttacaagcgcaagcgagtgagatggagcacgccattcgtaagcactgcaaagtcaatgcg
gatgatgacccagtcttccacaaaaaaatgagtgagaagctggatgagataatcaaaaag
cactctggcaactgggaaaagatgatcctggagctgagtgttttgcgagatgaaatcgac
gccggacgcggccctaacgcgcaaatttccgacccattcttcgatctgattgtcagcatt
gcattcccaaatggcgagcctgttaagcctctggacaaggtgaaagcctgtgtcgaagca
gttatggaacagcttggcgagaatattggcagcctagacttctgggaacgcgaagatttg
atttcggagctagaagggaaagttgaaatgcgcttcttactaagtggcgtacctcaattg
agtgagctaagtgaacaactgacaactgaagtagtggcattagcgcgcagaagggagttg
ttaattctgtctgaacaggcgctgaatgagcgtatcgatgaaattatcgaaaagcttcgt
gctattgaccctgaagcgttgcaaaaacaaatcagcgaacaaccagatctctcattgctg
aaatatgacttggatggtgttgatttatacctggctcaagagttggagcaatatgagagc
ttctacgaattagcgttgattaaggtcgctactgacatcaattacgcagagaacgaagaa
gatcgttcaacactgccgtatgaagtcaggaagcagtttttacttaatgctgaagatgtt
cgagaagctcttgccgatataattctatcaattcaatcagagctaactttccctgatttt
gaacataagcctatagttgccttaaaagagacagcaaaaggaagtttgttcataactgtt
gtcgtggggctaatgaccaattttatctacgatgtcattaaaacgactgccttgcaggga
cggcaaccgataaaagacatagttgcaaaaggtggtcgagttaaaagtgagttacctgca
ttggttgaacgaaatcgagcagagcgcgggcttaatgaatcaaattatcggatttcttat
accgaagaaagaaacttagttgatgatgcactaaaacaactgcgtgaccgcaatttatca
aaccaagataagaataaacatcactaa
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