Shewanella sp. Pdp11: AYJ58_19135
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Entry
AYJ58_19135 CDS
T11329
Symbol
ychF
Name
(GenBank) redox-regulated ATPase YchF
KO
K06942
ribosome-binding ATPase
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shep03009
]
AYJ58_19135 (ychF)
Ribosome biogenesis [BR:
shep03009
]
Prokaryotic type
Other maturation factors
AYJ58_19135 (ychF)
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Paralog
GFIT
Motif
Pfam:
YchF-GTPase_C
MMR_HSR1
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
AUD61453
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Position
complement(4421658..4422749)
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AA seq
363 aa
AA seq
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MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDPRLDALAAIVNP
QRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFDDDNIVHVANKVD
PAGDIEVINTELALADLDSLERAVQRQQKRAKGGDKDAKFEVEVLEKMRPILDEAKMLRS
MELSKEELEAVAYLNFLTLKPTMYIANVAEDGFENNPHLDAVRAIAATENAIVVAVCAAI
ESELAEMDISDRDEFMADLGIEEPGLDRVIRAGYQLLNLQTYFTAGVKEVRAWTVPVGAS
APQAAGVIHTDFERGFIRAQVMAFDDFIAHKGEAGAKEAGKLRVEGKTYIVKDGDVMHFL
FNV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaatgcggcattgttggtcttcctaacgttggtaaatcaacgctttttaat
gcgttaactaaggctggcatcgaagcggctaacttcccgttttgtaccattgaacctaac
acgggtgttgtacctgtgccggatccacgtctggatgcgttagctgcgattgtgaatcca
caacgtatattaccgaccactatggaattcgtggatatcgcgggtcttgtggctggtgca
tctaaaggcgaaggtttaggtaacaagttccttgctaacatccgtgaaaccgatgccatt
ggtcacgtagtacgctgtttcgatgatgacaatattgttcacgttgctaacaaggttgat
cccgctggcgatatcgaagtgattaacactgaattagccttagcggacttagacagctta
gagcgcgcggttcaacgccagcaaaaacgtgctaaaggcggtgataaagacgctaagttt
gaagtggaagtattagaaaaaatgcgtccaattttagacgaagcgaaaatgctgcgttca
atggaattatctaaagaagaactggaagccgttgcttaccttaacttcttaaccttaaag
ccgaccatgtatattgctaacgtggcagaagatggttttgagaataacccacacttagac
gctgttcgcgctattgctgccacagaaaacgctatcgttgttgctgtgtgcgccgcgatt
gaatctgaattagctgaaatggacatctcagatcgcgatgagtttatggctgatctgggt
atcgaagagcctggtttagatcgcgttatccgtgctggttatcaattactgaatttgcaa
acctatttcaccgcaggcgtgaaagaagtgcgtgcttggactgtgccagtcggtgcgagt
gccccgcaagcggcaggcgtgatccacaccgattttgaacgtggttttatccgtgctcaa
gtgatggcatttgatgactttatcgctcacaaaggtgaagcgggcgcgaaagaagccggt
aagttacgtgtggaaggcaaaacctatatcgttaaagatggcgatgtgatgcatttcttg
tttaacgtataa
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