Shewanella sp. Pdp11: AYJ58_19610
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Entry
AYJ58_19610 CDS
T11329
Name
(GenBank) TonB-dependent receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
shep Shewanella sp. Pdp11
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_19610
Transporters [BR:
shep02000
]
Other transporters
Pores ion channels [TC:
1
]
AYJ58_19610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
AUD61540
LinkDB
All DBs
Position
complement(4530276..4532330)
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AA seq
684 aa
AA seq
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MPSRYFTVSLCAMSVSLACSNTTFADDFHSQMLELNLLNDTFHSTADSLALGQLTALTVL
PADLNGNPASISMRSASQGVAVLQDRVYFSPAPYSAPQLQLLPNLLQQQSVTVTPMANMA
VGGQGAFGVVSYQTLPVAEQTENSKATLEGNTDSDYSVDVNWGVKQKEYGMILAVNYSDA
SGADRLLNGQDTDRQTTDILFKINAASLLGARSPQVTEFTYQFLDDDSYRSQLGLTPADW
QQDPMSLYSATAADKHQGRHHKYQLSHQVALSGGHKVITDFYYQSYSQQLNQLNQFDGQM
LDTQSLAALAAFERQPTVDGVAVASLQQDNDFSSFGVQTESVNQYGAHQISLSARYHTDK
AEMHLGEQQSLWQQDLSLVSDAPDALLAYTDDATAFTSAIDSLFNWDGLQLKLALAYEKV
DVNREINLAYAGLEAADFSDSDWMPQLGVLYHAGDWRFSADIRRSWTAASAGNLEQEAQV
SLQYQVSAQYASEHFNADIKTYVQDFDNLHVNCDAYTQCADSRLWVQGNVVDVQTKGVEL
NLGYQWELGSVQLPLALNYQYSNAEYQTNSCNEIQGCVVAGDRVAWLPEQQLQLSAGMKY
DEYELNANVFYQSEREMGQFGAELQPVAAQWRVDLAANYHFNRHHEIYFRIENLLDETLV
TTASNSGIRSENGRISYLGYQWRF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtcgttacttcacagtatcactctgtgcaatgtctgtatctcttgcctgttct
aacacaacgttcgccgatgatttccacagtcaaatgcttgaactgaacctgctcaatgac
acattccactcaactgctgacagtttagccttaggccagttaacggctttgacggtttta
cctgcggatcttaacggaaatccagcaagtattagtatgcgcagcgcgagtcaaggcgtg
gccgtattgcaagatagagtgtatttctcacctgcgccttattctgcgccgcaattacaa
ctattgcccaatctgctgcaacaacagagtgtcaccgtcacgccaatggcgaatatggct
gttggtgggcaaggggcgtttggggtggtgagttatcaaaccttacctgttgctgagcag
accgagaatagtaaggcgactctcgagggtaataccgattcagactacagtgtcgatgtg
aattggggcgtgaagcaaaaagagtatggcatgatactcgcggttaattacagtgatgct
agtggcgcggatcgtttgcttaatggtcaagatactgaccgccaaaccactgatatctta
tttaaaatcaatgctgcgagtttattaggtgccagaagtccacaggtgactgagtttacc
tatcagttcctcgatgatgatagctatcgctcccaactcggcttaacaccagcagattgg
caacaagatcctatgagtttgtattcagccactgcggcagataagcaccaagggcgacac
cataagtatcaattgtcgcaccaagttgcgttaagtggcgggcataaggtcatcacggac
ttttattatcaatcctattcgcagcaattaaatcaacttaatcaatttgatgggcaaatg
ctcgatacccagagtttagcagcgctggccgcatttgaacggcagccgacagtcgatggc
gtcgcggtcgcttcgttacaacaagacaatgattttagctcctttggggtacaaactgag
tccgtgaatcaatatggcgcccatcaaattagtttgagtgcccgttaccatacggataaa
gctgagatgcaccttggtgaacagcaaagtctatggcagcaggacttgagtttagtgagt
gatgcgccagatgcgctgttggcttataccgatgatgcgaccgcattcacctcggccatc
gattccttgtttaattgggacggattgcagctcaaactcgcgcttgcctatgaaaaagtg
gacgtcaatcgcgagatcaatctagcctacgccggactcgaagcggcggatttttctgat
agcgattggatgccacagcttggcgttttatatcatgctggagattggcgctttagtgca
gatattcgacgctcctggaccgccgcgagtgcggggaatcttgagcaagaagcgcaagtg
tcgctgcaatatcaagtcagcgcccaatatgctagcgagcattttaatgctgatattaaa
acctacgttcaagattttgataacctgcatgtcaattgcgatgcttatacccaatgcgcc
gacagccgtttgtgggttcaaggtaatgtcgtggatgtgcagaccaaaggggttgagctg
aatcttggctatcaatgggaactgggcagtgtgcagttgcctttggcattaaattatcag
tattcgaatgctgagtatcaaactaatagctgcaacgaaattcaaggctgcgtcgtggct
ggcgatagggtggcctggttacccgagcagcagctgcagttgagtgctggaatgaagtat
gacgaatatgaactgaacgcgaatgtcttttatcaatcggagcgggaaatgggccaattt
ggcgccgaattacagcctgtcgctgcacaatggcgggtagatttagcggcgaattatcat
tttaaccgtcaccatgagatttattttcggatagaaaacctcttagatgagacattagtc
acgacagcatcaaatagcggaattcgatcggaaaatggacgtattagctatttaggttat
caatggcgcttttaa
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