Shewanella sp. Pdp11: AYJ58_19620
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Entry
AYJ58_19620 CDS
T11329
Name
(GenBank) ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
shep Shewanella sp. Pdp11
Pathway
shep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYJ58_19620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shep02000
]
AYJ58_19620
Transporters [BR:
shep02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AYJ58_19620
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AUD61542
LinkDB
All DBs
Position
complement(4533174..4534292)
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AA seq
372 aa
AA seq
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MRKFGSVLVLMLLMGLSGCNPVASDAQNVAVSHAATDDPQAIPAIEWRLATSWPKNFPGL
GMAPERFAHLVDDMSNGRLKIQVYGAGELMPAFAIFDGVSQGKIQMAHAASYYWKGKAPA
AQFFSSIPFGMTAQEMNGWLHYGGGMALWEEVYRPFGIIPLAGGNTGMQMGGWFNKPINT
IADFKGLKIRMPGLGGEVLKRVGAIPVNMAGRELYGALQTGSIDAAEWVGRLNDLAFGLH
KVAKYYYYPGWHEPGSNMEFLINKAAFESLPQDLQAIVRVAARAINQDMLDEYTTRNVTA
LETLVNDEGVVLKAFPPKVLLELEKISKQVIEEQANQDPLMRKVYAAYHAYEQGVRQYHK
ISEDAYSQQRQH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagtttgggagtgtgctcgtcttaatgctgctgatggggctgagcggttgtaac
cccgtagccagtgatgcgcaaaacgtagccgtttcccatgccgcaacggatgatccccaa
gctatccccgcaattgaatggcgccttgcaacctcttggcccaaaaacttccccggttta
ggtatggcacctgagcgttttgcgcatttagtcgatgacatgtctaacggtcggttaaaa
attcaggtttatggtgcgggagaattgatgccagcgtttgccatctttgatggcgtgagt
cagggaaaaattcaaatggcccatgccgcttcttattactggaaaggtaaggcgcccgcg
gcgcagtttttttcatcgattccctttggtatgacagcgcaagaaatgaacggctggttg
cactacggcggtggcatggcgttgtgggaagaagtgtatcgcccctttggcatcattccc
ctcgcgggtggcaatacgggcatgcaaatgggcggctggttcaataaaccgattaatacc
attgccgattttaagggattgaagatccgcatgccgggcttgggcggcgaagtcttaaaa
cgtgtcggcgctatacctgtgaatatggcggggcgtgaactctatggtgccctgcaaacg
ggctcgattgatgcggcagagtgggtggggcgattgaacgaccttgcttttggtttacat
aaagtggcgaagtactactattacccaggttggcatgagccgggttccaatatggaattt
ttgattaataaagctgccttcgagagtttacctcaagatttacaagccatagtgagagtc
gcggcgagagcgattaaccaagatatgctcgatgaatacacgacccgcaatgtgacggcc
cttgaaaccttagtgaatgatgaaggggtagtgcttaaagcatttccaccgaaagtgttg
ttggaacttgagaaaatctctaagcaagtgattgaagaacaagctaatcaagatccttta
atgcgcaaagtgtacgccgcctatcacgcctacgagcaaggtgtacgccagtatcataaa
atatctgaggatgcttacagccagcagcgtcaacactaa
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