Shewanella sp. Pdp11: AYJ58_21280
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Entry
AYJ58_21280 CDS
T11329
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
shep Shewanella sp. Pdp11
Pathway
shep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AYJ58_21280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shep03400
]
AYJ58_21280
DNA repair and recombination proteins [BR:
shep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
AYJ58_21280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AUD61847
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Position
complement(4929441..4931327)
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AA seq
628 aa
AA seq
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MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG
SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEA
WQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL
VRGDIHFTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGYL
QSPWSPVITDTHFFYVNGRLIRDRLVNHAVLQAFAQKAELEQPGYVLMLDIDPHQVDVNV
HPAKHEVRFHQSRYVHDYILQALQSALEEAGELNVVHSSSLDEVEDVFVDSPTSAVGIAA
PFALGADTFESAQYAVAPAVQVKSASAGREGASFSTQTNAFGSMATPRDSSRGSYSASES
RQRTELPSKAAIASYGALLQTPAYSVKDQDYQLSLPMPAILDGQYWVMVTEDKLSLLPIK
SVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQ
LIIKKVPPYIRESQLAKVIPDWLQSLRFETPAPSALAFWLAKHSLAGFVSAPEIWAAFSQ
LADDKKQLIANKAISLPWQSWLEEQASE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggcattcagatcctgccaccgcaattagccaaccaaattgcggcgggggaagtggtt
gagagacccgcttccgtagtcaaagaattggtcgagaatagcctcgacgcaggagcgagc
cgagtcgatattgaaatcgataaaggcggcagcaagctgattaaaattcgcgataacggc
tctggcatacccaaagatgaactcgcattggccttatcgcgccatgcgacttcaaagttg
cacaccttagacgatcttgaagctatcctcagttttggtttccgtggtgaagcgttagcc
agtatcagctcagtctcacgcttaacgttgacgtcgcgaactgcagatcaaaccgaagca
tggcaagcccatgccgaaggtgccgacatggcggttaaagtcatgcccgccgcgcatcct
gttggttcgacgattgaagtggtggatttattctttaatacgccggctcgcagacgcttt
ttaaagagcgataaaaccgaatttacccatatcgatgaatggttaaagcgcatcgcctta
gtgcgcggcgatatccatttcacactgacccataacggcaagacggtacgcaattatcgt
cccgccatgaatgaagcccagtatttacaacgtttgacgcaagtaagtggtcgcccattt
gctgagcaagcgcttaagattgaatgtcaacacgatgatttgcgcctcagtggttattta
cagtcaccttggtcgccggtgattactgatacccattttttttatgtcaacggacggctt
atccgtgaccgcttagtcaatcatgctgtgctccaagcctttgcccaaaaagcagaactg
gagcaacccggctatgtgttgatgctggatatcgatccccatcaagtggatgtaaacgtg
catcctgctaaacatgaggtacgattccatcagagtcgctatgtgcatgattatattttg
caggcactgcaatcggcgctggaagaagcaggggaactcaacgtcgttcactctagttcc
ttggatgaagttgaagatgtgtttgtggattctccaacaagcgcagttggaatagctgcc
ccttttgcacttggtgctgatacatttgagtctgctcaatatgcagttgcccctgccgtt
caagtaaaatctgccagcgcaggacgagaaggcgccagttttagcactcaaaccaatgcc
tttggcagcatggccacgccaagggacagtagtcgcggcagttattctgcaagtgaatct
cggcaacgtactgaattaccgtcaaaagcggcaattgcaagttatggggctttactgcaa
acacctgcttacagtgtaaaagatcaagattatcagctatctttgcctatgcctgcgatt
ttagatggccaatattgggtaatggttacggaagataagctcagtctattgccaataaaa
tcagtagcattggcgacgcgttgccaagagattgaagctaagctagcgaccggattaatt
gggcagcctctactgatgccagtgtctgtcgcggccgatgcagattggcaggctgtgctc
gatgaacatgacacgctgatccgccaattaggtttagaactaacaattcgttaccagcag
ttgattattaaaaaagtgcccccatatatcagagagagccagttagccaaagtgatccct
gattggctacaatcgcttcgttttgaaacacctgcgccaagcgcattggcattttggttg
gcaaaacacagtttagcgggattcgtttcggcgccagaaatttgggctgcattttcgcag
ttagctgacgacaaaaaacagcttattgccaataaagcaatatcattaccttggcaatcg
tggctagaagagcaagcaagtgaataa
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