Shewanella sp. WE21: CKQ84_00685
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Entry
CKQ84_00685 CDS
T05404
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
shew
Shewanella sp. WE21
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
HTH_30
AAA_16
HTH_50
HTH_Tnp_ISL3
HTH_28
AAA_22
Phage_CP76
HTH_7
HTH_10
Mor
MCM
nSTAND3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AVI64513
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Position
complement(166059..167429)
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AA seq
456 aa
AA seq
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MARLTLFYHLQDVGAEQAIIELAGAADFNKLRSVDDLPWIEQLGANHVDVAIIELSSLSR
EDYLVLLDNAAMSNIEFIFLSDGQPNPNLDQLMSHFAGYHFRKPYDMPLISEIFADFAQY
LASSPNRLHPFASELDQYGLLVGSSAPMHKLYRTIRRVSATGSNVLIIGESGVGKELVAN
TIHLASPRVNEPFIAINCGALSPELVDSELFGHVKGAFTGANRDHKGVFEQAEDGTLFLD
EVTEMPIDHQVKLLRVLENSEYRPVGGDKVQRANVRIVAATNRDPIVAIEAGLFREDLYF
RLAQFPIRVPPLRERGEDIIGLAQHFLAYRNVAEKQNKSLAEDCIQMIAKYPWSGNVREL
KHAIERAYILADQDILPSHLQLPQTNEVGLCGGEQVVIPQGMRLDDLERIAIYQALETTQ
GNKTDTAEQLGISVKTLYNKLSKYEQKVETGETTAE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctcgactgacacttttttatcacttgcaggatgttggcgccgagcaagcaatcatc
gaacttgctggcgctgctgactttaataagctacgcagtgtcgatgacttgccttggata
gagcagctaggggcaaatcacgtcgatgttgccattattgagttatccagtcttagtcgt
gaagattaccttgtgctgctagataatgcggccatgtcaaatattgagtttatttttctc
tccgacggccagccaaaccccaatcttgatcagttaatgtctcattttgcgggttaccac
tttcgcaaaccttacgatatgccgctaatcagcgaaatttttgctgattttgcacagtat
ttagcatcatcgcctaatcgactgcatccttttgctagcgagctagaccaatacggtttg
cttgttggttcatcagctcctatgcacaagctatatcgcacaattcgtcgcgtctctgcg
acaggtagtaatgtgctgattattggggaaagtggggtcgggaaagaactggttgctaat
accatacatcttgccagccctagggtgaacgagccttttattgcgattaactgtggtgca
ttaagcccagaattggtcgacagtgagctgtttggtcatgtcaaaggtgcatttacgggg
gcgaatcgcgaccacaaaggcgtatttgaacaggctgaagacgggactttgtttctcgat
gaagtcaccgaaatgccgattgatcatcaagtgaagttactcagagtgttggaaaatagc
gagtatcgtcctgtgggtggtgacaaagtgcaacgtgcaaacgtacgtattgtggcagcg
actaaccgtgatcccatagtggcgatagaggcagggctatttcgagaagatttgtacttt
cgtttggctcagtttcccattcgcgttccgcccttacgggaacgtggcgaagatattatt
gggcttgcgcagcattttcttgcctatcgtaacgtggccgaaaagcagaataagagctta
gctgaagactgtattcagatgattgctaagtacccttggtctggtaatgtgcgcgaatta
aaacatgcaattgagcgagcctatattctggccgatcaggatattttacccagccattta
cagctacctcagacgaatgaagtgggtttatgtggtggtgagcaagttgttatcccccaa
ggcatgcgcttagatgatttagagagaatcgctatttatcaagcactagaaaccactcaa
ggtaataaaacggataccgccgaacaactggggatcagcgttaaaaccctctacaacaag
ctcagcaagtacgagcagaaagtcgagaccggtgaaacgactgctgaataa
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