Shewanella sp. WE21: CKQ84_00915
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Entry
CKQ84_00915 CDS
T05404
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
shew
Shewanella sp. WE21
Pathway
shew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CKQ84_00915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_00915
Enzymes [BR:
shew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CKQ84_00915
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CKQ84_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF6687
DUF6730
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AVI64553
LinkDB
All DBs
Position
225772..226011
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AA seq
79 aa
AA seq
DB search
MAKKPENLSFEESLGELERIVADLEQGDISLDDALKQFERGINLVRNSQAKLEQAQQKVA
ILLKQDENAPLSPYAVEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagaaacccgaaaatcttagttttgaagaatcccttggcgaacttgaacgcatc
gttgccgatctagaacaaggcgatatctccctcgatgacgcgttaaaacaatttgaacgt
ggcatcaatctcgttcgaaatagccaagcaaaactcgaacaagcccaacaaaaagtggcc
attttactgaaacaagacgaaaatgcgcccctatccccctatgccgttgagggcgaataa
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